Gene : Tp57577_TGAC_v2_gene23176 T. pratense v2
Defline:  (1 of 1) PTHR31642:SF24 - HXXXD-TYPE ACYL-TRANSFERASE-LIKE PROTEIN Genomic Order:  1
Name:  ? Tp57577_TGAC_v2_gene23176 Secondary Identifier:  ? PAC:35991397
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-4203 Trifolium pratense pathologic  
Tpratense PWY-5835 Trifolium pratense pathologic  
Tpratense PWY-6801 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene23176 0.5kb upstream 0.5kb upstream 2288 true Tp57577_TGAC_v2_scaf_988: 2156-4443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_988: 2156-2655 Trifolium pratense
Tp57577_TGAC_v2_gene23176 0.5kb downstream 0.5kb downstream 2288 true Tp57577_TGAC_v2_scaf_988: 2656-4943 Trifolium pratense
Tp57577_TGAC_v2_gene23176 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_988: 4444-4943 Trifolium pratense
Tp57577_TGAC_v2_gene23176 1.0kb upstream 1.0kb upstream 2788 true Tp57577_TGAC_v2_scaf_988: 1656-4443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_988: 1656-2655 Trifolium pratense
Tp57577_TGAC_v2_gene23176 1.0kb downstream 1.0kb downstream 2788 true Tp57577_TGAC_v2_scaf_988: 2656-5443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_988: 4444-5443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 2.0kb upstream 2.0kb upstream 3788 true Tp57577_TGAC_v2_scaf_988: 656-4443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_988: 656-2655 Trifolium pratense
Tp57577_TGAC_v2_gene23176 2.0kb downstream 2.0kb downstream 3788 true Tp57577_TGAC_v2_scaf_988: 2656-6443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_988: 4444-6443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 5.0kb upstream 5.0kb upstream 4443 true Tp57577_TGAC_v2_scaf_988: 1-4443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 5.0kb upstream 5.0kb upstream 2655 false Tp57577_TGAC_v2_scaf_988: 1-2655 Trifolium pratense
Tp57577_TGAC_v2_gene23176 5.0kb downstream 5.0kb downstream 6788 true Tp57577_TGAC_v2_scaf_988: 2656-9443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_988: 4444-9443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 10.0kb upstream 10.0kb upstream 4443 true Tp57577_TGAC_v2_scaf_988: 1-4443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 10.0kb upstream 10.0kb upstream 2655 false Tp57577_TGAC_v2_scaf_988: 1-2655 Trifolium pratense
Tp57577_TGAC_v2_gene23176 10.0kb downstream 10.0kb downstream 11788 true Tp57577_TGAC_v2_scaf_988: 2656-14443 Trifolium pratense
Tp57577_TGAC_v2_gene23176 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_988: 4444-14443 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306898 5265 Fabidae View MSA
124061522 5270 Rosid View MSA
123756556 5271 Pentapetalae View MSA
122797720 5272 Eudicot View MSA
122051643 5273 Angiosperm View MSA
121350983 5274 Embryophyte View MSA
123428782 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain