Gene : Tp57577_TGAC_v2_gene28690 T. pratense v2
Defline:  (1 of 1) PF00169//PF01237 - PH domain (PH) // Oxysterol-binding protein (Oxysterol_BP) Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene28690 Secondary Identifier:  ? PAC:35966819
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene28690 0.5kb upstream 0.5kb upstream 6130 true Tp57577_TGAC_v2_scaf_810: 40306-46435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_810: 40306-40805 Trifolium pratense
Tp57577_TGAC_v2_gene28690 0.5kb downstream 0.5kb downstream 6130 true Tp57577_TGAC_v2_scaf_810: 40806-46935 Trifolium pratense
Tp57577_TGAC_v2_gene28690 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_810: 46436-46935 Trifolium pratense
Tp57577_TGAC_v2_gene28690 1.0kb upstream 1.0kb upstream 6630 true Tp57577_TGAC_v2_scaf_810: 39806-46435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_810: 39806-40805 Trifolium pratense
Tp57577_TGAC_v2_gene28690 1.0kb downstream 1.0kb downstream 6630 true Tp57577_TGAC_v2_scaf_810: 40806-47435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_810: 46436-47435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 2.0kb upstream 2.0kb upstream 7630 true Tp57577_TGAC_v2_scaf_810: 38806-46435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_810: 38806-40805 Trifolium pratense
Tp57577_TGAC_v2_gene28690 2.0kb downstream 2.0kb downstream 7630 true Tp57577_TGAC_v2_scaf_810: 40806-48435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_810: 46436-48435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 5.0kb upstream 5.0kb upstream 10630 true Tp57577_TGAC_v2_scaf_810: 35806-46435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_810: 35806-40805 Trifolium pratense
Tp57577_TGAC_v2_gene28690 5.0kb downstream 5.0kb downstream 10630 true Tp57577_TGAC_v2_scaf_810: 40806-51435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_810: 46436-51435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 10.0kb upstream 10.0kb upstream 15630 true Tp57577_TGAC_v2_scaf_810: 30806-46435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_810: 30806-40805 Trifolium pratense
Tp57577_TGAC_v2_gene28690 10.0kb downstream 10.0kb downstream 15630 true Tp57577_TGAC_v2_scaf_810: 40806-56435 Trifolium pratense
Tp57577_TGAC_v2_gene28690 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_810: 46436-56435 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041393 5273 Angiosperm View MSA
122297387 5265 Fabidae View MSA
124036009 5270 Rosid View MSA
123750665 5271 Pentapetalae View MSA
122795598 5272 Eudicot View MSA
121348669 5274 Embryophyte View MSA
123428535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain