Gene : Tp57577_TGAC_v2_gene7588 T. pratense v2
Defline:  (1 of 2) PTHR31707:SF11 - PECTINESTERASE/PECTINESTERASE INHIBITOR 17-RELATED Genomic Order:  3
Name:  ? Tp57577_TGAC_v2_gene7588 Secondary Identifier:  ? PAC:35954389
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene7588 0.5kb upstream 0.5kb upstream 3659 true Tp57577_TGAC_v2_scaf_545: 29197-32855 Trifolium pratense
Tp57577_TGAC_v2_gene7588 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_545: 32356-32855 Trifolium pratense
Tp57577_TGAC_v2_gene7588 0.5kb downstream 0.5kb downstream 3659 true Tp57577_TGAC_v2_scaf_545: 28697-32355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_545: 28697-29196 Trifolium pratense
Tp57577_TGAC_v2_gene7588 1.0kb upstream 1.0kb upstream 4159 true Tp57577_TGAC_v2_scaf_545: 29197-33355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_545: 32356-33355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 1.0kb downstream 1.0kb downstream 4159 true Tp57577_TGAC_v2_scaf_545: 28197-32355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_545: 28197-29196 Trifolium pratense
Tp57577_TGAC_v2_gene7588 2.0kb upstream 2.0kb upstream 5159 true Tp57577_TGAC_v2_scaf_545: 29197-34355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_545: 32356-34355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 2.0kb downstream 2.0kb downstream 5159 true Tp57577_TGAC_v2_scaf_545: 27197-32355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_545: 27197-29196 Trifolium pratense
Tp57577_TGAC_v2_gene7588 5.0kb upstream 5.0kb upstream 8159 true Tp57577_TGAC_v2_scaf_545: 29197-37355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_545: 32356-37355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 5.0kb downstream 5.0kb downstream 8159 true Tp57577_TGAC_v2_scaf_545: 24197-32355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_545: 24197-29196 Trifolium pratense
Tp57577_TGAC_v2_gene7588 10.0kb upstream 10.0kb upstream 13159 true Tp57577_TGAC_v2_scaf_545: 29197-42355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_545: 32356-42355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 10.0kb downstream 10.0kb downstream 13159 true Tp57577_TGAC_v2_scaf_545: 19197-32355 Trifolium pratense
Tp57577_TGAC_v2_gene7588 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_545: 19197-29196 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310355 5265 Fabidae View MSA
124070854 5270 Rosid View MSA
123751128 5271 Pentapetalae View MSA
122793966 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain