Gene : Tp57577_TGAC_v2_gene27811 T. pratense v2
Defline:  (1 of 6) PTHR31375:SF10 - GLYCOSIDE HYDROLASE FAMILY 28 PROTEIN-RELATED Genomic Order:  6
Name:  ? Tp57577_TGAC_v2_gene27811 Secondary Identifier:  ? PAC:35959556
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tpratense PWY-1081 Trifolium pratense pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene27811 0.5kb upstream 0.5kb upstream 1818 true Tp57577_TGAC_v2_scaf_843: 74096-75913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_843: 74096-74595 Trifolium pratense
Tp57577_TGAC_v2_gene27811 0.5kb downstream 0.5kb downstream 1818 true Tp57577_TGAC_v2_scaf_843: 74596-76413 Trifolium pratense
Tp57577_TGAC_v2_gene27811 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_843: 75914-76413 Trifolium pratense
Tp57577_TGAC_v2_gene27811 1.0kb upstream 1.0kb upstream 2318 true Tp57577_TGAC_v2_scaf_843: 73596-75913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_843: 73596-74595 Trifolium pratense
Tp57577_TGAC_v2_gene27811 1.0kb downstream 1.0kb downstream 2318 true Tp57577_TGAC_v2_scaf_843: 74596-76913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_843: 75914-76913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 2.0kb upstream 2.0kb upstream 3318 true Tp57577_TGAC_v2_scaf_843: 72596-75913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_843: 72596-74595 Trifolium pratense
Tp57577_TGAC_v2_gene27811 2.0kb downstream 2.0kb downstream 3318 true Tp57577_TGAC_v2_scaf_843: 74596-77913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_843: 75914-77913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 5.0kb upstream 5.0kb upstream 6318 true Tp57577_TGAC_v2_scaf_843: 69596-75913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_843: 69596-74595 Trifolium pratense
Tp57577_TGAC_v2_gene27811 5.0kb downstream 5.0kb downstream 6318 true Tp57577_TGAC_v2_scaf_843: 74596-80913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_843: 75914-80913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 10.0kb upstream 10.0kb upstream 11318 true Tp57577_TGAC_v2_scaf_843: 64596-75913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_843: 64596-74595 Trifolium pratense
Tp57577_TGAC_v2_gene27811 10.0kb downstream 10.0kb downstream 11318 true Tp57577_TGAC_v2_scaf_843: 74596-85913 Trifolium pratense
Tp57577_TGAC_v2_gene27811 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_843: 75914-85913 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315226 5265 Fabidae View MSA
124074410 5270 Rosid View MSA
123753570 5271 Pentapetalae View MSA
122797497 5272 Eudicot View MSA
122051291 5273 Angiosperm View MSA
121350352 5274 Embryophyte View MSA
123381691 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain