Gene : Tp57577_TGAC_v2_gene14971 T. pratense v2
Defline:  (1 of 1) PTHR12161:SF19 - REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN Genomic Order:  8
Name:  ? Tp57577_TGAC_v2_gene14971 Secondary Identifier:  ? PAC:35954229
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Tp57577_TGAC_v2_gene14971 0.5kb upstream 0.5kb upstream 5081 true Tp57577_TGAC_v2_scaf_590: 80796-85876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 0.5kb upstream 0.5kb upstream 500 false Tp57577_TGAC_v2_scaf_590: 80796-81295 Trifolium pratense
Tp57577_TGAC_v2_gene14971 0.5kb downstream 0.5kb downstream 5081 true Tp57577_TGAC_v2_scaf_590: 81296-86376 Trifolium pratense
Tp57577_TGAC_v2_gene14971 0.5kb downstream 0.5kb downstream 500 false Tp57577_TGAC_v2_scaf_590: 85877-86376 Trifolium pratense
Tp57577_TGAC_v2_gene14971 1.0kb upstream 1.0kb upstream 5581 true Tp57577_TGAC_v2_scaf_590: 80296-85876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 1.0kb upstream 1.0kb upstream 1000 false Tp57577_TGAC_v2_scaf_590: 80296-81295 Trifolium pratense
Tp57577_TGAC_v2_gene14971 1.0kb downstream 1.0kb downstream 5581 true Tp57577_TGAC_v2_scaf_590: 81296-86876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 1.0kb downstream 1.0kb downstream 1000 false Tp57577_TGAC_v2_scaf_590: 85877-86876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 2.0kb upstream 2.0kb upstream 6581 true Tp57577_TGAC_v2_scaf_590: 79296-85876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 2.0kb upstream 2.0kb upstream 2000 false Tp57577_TGAC_v2_scaf_590: 79296-81295 Trifolium pratense
Tp57577_TGAC_v2_gene14971 2.0kb downstream 2.0kb downstream 6581 true Tp57577_TGAC_v2_scaf_590: 81296-87876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 2.0kb downstream 2.0kb downstream 2000 false Tp57577_TGAC_v2_scaf_590: 85877-87876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 5.0kb upstream 5.0kb upstream 9581 true Tp57577_TGAC_v2_scaf_590: 76296-85876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 5.0kb upstream 5.0kb upstream 5000 false Tp57577_TGAC_v2_scaf_590: 76296-81295 Trifolium pratense
Tp57577_TGAC_v2_gene14971 5.0kb downstream 5.0kb downstream 9581 true Tp57577_TGAC_v2_scaf_590: 81296-90876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 5.0kb downstream 5.0kb downstream 5000 false Tp57577_TGAC_v2_scaf_590: 85877-90876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 10.0kb upstream 10.0kb upstream 14581 true Tp57577_TGAC_v2_scaf_590: 71296-85876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 10.0kb upstream 10.0kb upstream 10000 false Tp57577_TGAC_v2_scaf_590: 71296-81295 Trifolium pratense
Tp57577_TGAC_v2_gene14971 10.0kb downstream 10.0kb downstream 14581 true Tp57577_TGAC_v2_scaf_590: 81296-95876 Trifolium pratense
Tp57577_TGAC_v2_gene14971 10.0kb downstream 10.0kb downstream 10000 false Tp57577_TGAC_v2_scaf_590: 85877-95876 Trifolium pratense

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026573 5273 Angiosperm View MSA
122302069 5265 Fabidae View MSA
124050952 5270 Rosid View MSA
123738388 5271 Pentapetalae View MSA
122790971 5272 Eudicot View MSA
121350449 5274 Embryophyte View MSA
123424640 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain