Gene : estExt_fgenesh1_pm.C_90281 M. pusilla CCMP1545 v3.0
Defline:  (1 of 2) 6.1.1.15 - Proline--tRNA ligase / Prolyl-tRNA synthetase Genomic Order:  498
Name:  ? estExt_fgenesh1_pm.C_90281 Secondary Identifier:  ? PAC:27344300
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MpusillaCCMP1545 TRNA-CHARGING-PWY Micromonas pusilla CCMP1545 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_90281 0.5kb upstream 0.5kb upstream 2384 true scaffold_9: 1012173-1014556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1014057-1014556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 0.5kb downstream 0.5kb downstream 2384 true scaffold_9: 1011673-1014056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1011673-1012172 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 1.0kb upstream 1.0kb upstream 2884 true scaffold_9: 1012173-1015056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1014057-1015056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 1.0kb downstream 1.0kb downstream 2884 true scaffold_9: 1011173-1014056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1011173-1012172 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 2.0kb upstream 2.0kb upstream 3884 true scaffold_9: 1012173-1016056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1014057-1016056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 2.0kb downstream 2.0kb downstream 3884 true scaffold_9: 1010173-1014056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1010173-1012172 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 5.0kb upstream 5.0kb upstream 6884 true scaffold_9: 1012173-1019056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1014057-1019056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 5.0kb downstream 5.0kb downstream 6884 true scaffold_9: 1007173-1014056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1007173-1012172 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 10.0kb upstream 10.0kb upstream 11884 true scaffold_9: 1012173-1024056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1014057-1024056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 10.0kb downstream 10.0kb downstream 11884 true scaffold_9: 1002173-1014056 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_90281 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1002173-1012172 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110300 5260 Chlorophyte View MSA
123428629 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier