Gene : estExt_fgenesh2_kg.C_2_t20073 M. pusilla CCMP1545 v3.0
Defline:  (1 of 1) PTHR11540:SF14 - MALATE DEHYDROGENASE, CHLOROPLASTIC Genomic Order:  841
Name:  ? estExt_fgenesh2_kg.C_2_t20073 Secondary Identifier:  ? PAC:27342565
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MpusillaCCMP1545 GLUCONEO-PWY Micromonas pusilla CCMP1545 pathologic  
MpusillaCCMP1545 PWY-7115 Micromonas pusilla CCMP1545 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh2_kg.C_2_t20073 0.5kb upstream 0.5kb upstream 3196 true scaffold_2: 2147645-2150840 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 2150341-2150840 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 0.5kb downstream 0.5kb downstream 3196 true scaffold_2: 2147145-2150340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 2147145-2147644 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 1.0kb upstream 1.0kb upstream 3696 true scaffold_2: 2147645-2151340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 2150341-2151340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 1.0kb downstream 1.0kb downstream 3696 true scaffold_2: 2146645-2150340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 2146645-2147644 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 2.0kb upstream 2.0kb upstream 4696 true scaffold_2: 2147645-2152340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 2150341-2152340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 2.0kb downstream 2.0kb downstream 4696 true scaffold_2: 2145645-2150340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 2145645-2147644 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 5.0kb upstream 5.0kb upstream 7696 true scaffold_2: 2147645-2155340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 2150341-2155340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 5.0kb downstream 5.0kb downstream 7696 true scaffold_2: 2142645-2150340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 2142645-2147644 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 10.0kb upstream 10.0kb upstream 12696 true scaffold_2: 2147645-2160340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 2150341-2160340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 10.0kb downstream 10.0kb downstream 12696 true scaffold_2: 2137645-2150340 Micromonas pusilla CCMP1545
estExt_fgenesh2_kg.C_2_t20073 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 2137645-2147644 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111621 5260 Chlorophyte View MSA
123426123 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier