Gene : gm1.5520_g M. pusilla CCMP1545 v3.0

Defline:  (1 of 36) PF14311 - Probable Zinc-ribbon domain (DUF4379) Genomic Order:  9
Name:  ? gm1.5520_g Secondary Identifier:  ? PAC:27344509

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
gm1.5520_g 0.5kb upstream 0.5kb upstream 1019 true scaffold_9: 16023-17041 Micromonas pusilla CCMP1545
gm1.5520_g 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 16023-16522 Micromonas pusilla CCMP1545
gm1.5520_g 0.5kb downstream 0.5kb downstream 1019 true scaffold_9: 16523-17541 Micromonas pusilla CCMP1545
gm1.5520_g 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 17042-17541 Micromonas pusilla CCMP1545
gm1.5520_g 1.0kb upstream 1.0kb upstream 1519 true scaffold_9: 15523-17041 Micromonas pusilla CCMP1545
gm1.5520_g 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 15523-16522 Micromonas pusilla CCMP1545
gm1.5520_g 1.0kb downstream 1.0kb downstream 1519 true scaffold_9: 16523-18041 Micromonas pusilla CCMP1545
gm1.5520_g 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 17042-18041 Micromonas pusilla CCMP1545
gm1.5520_g 2.0kb upstream 2.0kb upstream 2519 true scaffold_9: 14523-17041 Micromonas pusilla CCMP1545
gm1.5520_g 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 14523-16522 Micromonas pusilla CCMP1545
gm1.5520_g 2.0kb downstream 2.0kb downstream 2519 true scaffold_9: 16523-19041 Micromonas pusilla CCMP1545
gm1.5520_g 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 17042-19041 Micromonas pusilla CCMP1545
gm1.5520_g 5.0kb upstream 5.0kb upstream 5519 true scaffold_9: 11523-17041 Micromonas pusilla CCMP1545
gm1.5520_g 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 11523-16522 Micromonas pusilla CCMP1545
gm1.5520_g 5.0kb downstream 5.0kb downstream 5519 true scaffold_9: 16523-22041 Micromonas pusilla CCMP1545
gm1.5520_g 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 17042-22041 Micromonas pusilla CCMP1545
gm1.5520_g 10.0kb upstream 10.0kb upstream 10519 true scaffold_9: 6523-17041 Micromonas pusilla CCMP1545
gm1.5520_g 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 6523-16522 Micromonas pusilla CCMP1545
gm1.5520_g 10.0kb downstream 10.0kb downstream 10519 true scaffold_9: 16523-27041 Micromonas pusilla CCMP1545
gm1.5520_g 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 17042-27041 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124105078 5260 Chlorophyte View MSA
123419977 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier