Gene : estExt_Genemark1.C_3_t20166 M. pusilla CCMP1545 v3.0
Defline:  (1 of 3) PF00090 - Thrombospondin type 1 domain (TSP_1) Genomic Order:  714
Name:  ? estExt_Genemark1.C_3_t20166 Secondary Identifier:  ? PAC:27347468
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_Genemark1.C_3_t20166 0.5kb upstream 0.5kb upstream 3121 true scaffold_3: 1392418-1395538 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 1395039-1395538 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 0.5kb downstream 0.5kb downstream 3121 true scaffold_3: 1391918-1395038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 1391918-1392417 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 1.0kb upstream 1.0kb upstream 3621 true scaffold_3: 1392418-1396038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 1395039-1396038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 1.0kb downstream 1.0kb downstream 3621 true scaffold_3: 1391418-1395038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 1391418-1392417 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 2.0kb upstream 2.0kb upstream 4621 true scaffold_3: 1392418-1397038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 1395039-1397038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 2.0kb downstream 2.0kb downstream 4621 true scaffold_3: 1390418-1395038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 1390418-1392417 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 5.0kb upstream 5.0kb upstream 7621 true scaffold_3: 1392418-1400038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 1395039-1400038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 5.0kb downstream 5.0kb downstream 7621 true scaffold_3: 1387418-1395038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 1387418-1392417 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 10.0kb upstream 10.0kb upstream 12621 true scaffold_3: 1392418-1405038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 1395039-1405038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 10.0kb downstream 10.0kb downstream 12621 true scaffold_3: 1382418-1395038 Micromonas pusilla CCMP1545
estExt_Genemark1.C_3_t20166 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 1382418-1392417 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124105118 5260 Chlorophyte View MSA
123420015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier