Gene : MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 M. pusilla CCMP1545 v3.0

Defline:  (1 of 1) PTHR11778:SF0 - SERINE--TRNA LIGASE, MITOCHONDRIAL Genomic Order:  141
Name:  ? MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 Secondary Identifier:  ? PAC:27346060

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MpusillaCCMP1545 PWY-6281 Micromonas pusilla CCMP1545 pathologic  
MpusillaCCMP1545 TRNA-CHARGING-PWY Micromonas pusilla CCMP1545 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 0.5kb upstream 0.5kb upstream 2695 true scaffold_4: 291572-294266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 291572-292071 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 0.5kb downstream 0.5kb downstream 2695 true scaffold_4: 292072-294766 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 294267-294766 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 1.0kb upstream 1.0kb upstream 3195 true scaffold_4: 291072-294266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 291072-292071 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 1.0kb downstream 1.0kb downstream 3195 true scaffold_4: 292072-295266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 294267-295266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 2.0kb upstream 2.0kb upstream 4195 true scaffold_4: 290072-294266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 290072-292071 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 2.0kb downstream 2.0kb downstream 4195 true scaffold_4: 292072-296266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 294267-296266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 5.0kb upstream 5.0kb upstream 7195 true scaffold_4: 287072-294266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 287072-292071 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 5.0kb downstream 5.0kb downstream 7195 true scaffold_4: 292072-299266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 294267-299266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 10.0kb upstream 10.0kb upstream 12195 true scaffold_4: 282072-294266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 282072-292071 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 10.0kb downstream 10.0kb downstream 12195 true scaffold_4: 292072-304266 Micromonas pusilla CCMP1545
MicpuC2.MSI_MSI_estExt_Genewise1.C_40173 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 294267-304266 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124111071 5260 Chlorophyte View MSA
123424928 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier