Gene : estExt_fgenesh1_pm.C_110040 M. pusilla CCMP1545 v3.0
Defline:  (1 of 1) PTHR11946:SF53 - TYROSINE-TRNA LIGASE Genomic Order:  101
Name:  ? estExt_fgenesh1_pm.C_110040 Secondary Identifier:  ? PAC:27339343
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MpusillaCCMP1545 TRNA-CHARGING-PWY Micromonas pusilla CCMP1545 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pm.C_110040 0.5kb upstream 0.5kb upstream 2082 true scaffold_11: 209057-211138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 209057-209556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 0.5kb downstream 0.5kb downstream 2082 true scaffold_11: 209557-211638 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 211139-211638 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 1.0kb upstream 1.0kb upstream 2582 true scaffold_11: 208557-211138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 208557-209556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 1.0kb downstream 1.0kb downstream 2582 true scaffold_11: 209557-212138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 211139-212138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 2.0kb upstream 2.0kb upstream 3582 true scaffold_11: 207557-211138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 207557-209556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 2.0kb downstream 2.0kb downstream 3582 true scaffold_11: 209557-213138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 211139-213138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 5.0kb upstream 5.0kb upstream 6582 true scaffold_11: 204557-211138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 204557-209556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 5.0kb downstream 5.0kb downstream 6582 true scaffold_11: 209557-216138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 211139-216138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 10.0kb upstream 10.0kb upstream 11582 true scaffold_11: 199557-211138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 199557-209556 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 10.0kb downstream 10.0kb downstream 11582 true scaffold_11: 209557-221138 Micromonas pusilla CCMP1545
estExt_fgenesh1_pm.C_110040 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 211139-221138 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124108408 5260 Chlorophyte View MSA
123424631 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier