Gene : estExt_fgenesh1_pg.C_110066 M. pusilla CCMP1545 v3.0
Defline:  (1 of 1) PTHR11451:SF41 - GLUTAMATE--TRNA LIGASE, MITOCHONDRIAL-RELATED Genomic Order:  187
Name:  ? estExt_fgenesh1_pg.C_110066 Secondary Identifier:  ? PAC:27339335
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
MpusillaCCMP1545 PWY-5188 Micromonas pusilla CCMP1545 pathologic  
MpusillaCCMP1545 TRNA-CHARGING-PWY Micromonas pusilla CCMP1545 pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
estExt_fgenesh1_pg.C_110066 0.5kb upstream 0.5kb upstream 5104 true scaffold_11: 408983-414086 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 0.5kb upstream 0.5kb upstream 500 false scaffold_11: 413587-414086 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 0.5kb downstream 0.5kb downstream 5104 true scaffold_11: 408483-413586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 0.5kb downstream 0.5kb downstream 500 false scaffold_11: 408483-408982 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 1.0kb upstream 1.0kb upstream 5604 true scaffold_11: 408983-414586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 1.0kb upstream 1.0kb upstream 1000 false scaffold_11: 413587-414586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 1.0kb downstream 1.0kb downstream 5604 true scaffold_11: 407983-413586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 1.0kb downstream 1.0kb downstream 1000 false scaffold_11: 407983-408982 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 2.0kb upstream 2.0kb upstream 6604 true scaffold_11: 408983-415586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 2.0kb upstream 2.0kb upstream 2000 false scaffold_11: 413587-415586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 2.0kb downstream 2.0kb downstream 6604 true scaffold_11: 406983-413586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 2.0kb downstream 2.0kb downstream 2000 false scaffold_11: 406983-408982 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 5.0kb upstream 5.0kb upstream 9604 true scaffold_11: 408983-418586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 5.0kb upstream 5.0kb upstream 5000 false scaffold_11: 413587-418586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 5.0kb downstream 5.0kb downstream 9604 true scaffold_11: 403983-413586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 5.0kb downstream 5.0kb downstream 5000 false scaffold_11: 403983-408982 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 10.0kb upstream 10.0kb upstream 14604 true scaffold_11: 408983-423586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 10.0kb upstream 10.0kb upstream 10000 false scaffold_11: 413587-423586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 10.0kb downstream 10.0kb downstream 14604 true scaffold_11: 398983-413586 Micromonas pusilla CCMP1545
estExt_fgenesh1_pg.C_110066 10.0kb downstream 10.0kb downstream 10000 false scaffold_11: 398983-408982 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124099388 5260 Chlorophyte Singleton cluster - no MSA
123414809 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

1 Strain

DB identifier