Gene : MicpuC2.est_orfs.2_3807_4269654:2 M. pusilla CCMP1545 v3.0
Defline:  (1 of 1) PF00595//PF03572 - PDZ domain (Also known as DHR or GLGF) (PDZ) // Peptidase family S41 (Peptidase_S41) Genomic Order:  248
Name:  ? MicpuC2.est_orfs.2_3807_4269654:2 Secondary Identifier:  ? PAC:27342896
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
MicpuC2.est_orfs.2_3807_4269654:2 0.5kb upstream 0.5kb upstream 2034 true scaffold_2: 602638-604671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 0.5kb upstream 0.5kb upstream 500 false scaffold_2: 602638-603137 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 0.5kb downstream 0.5kb downstream 2034 true scaffold_2: 603138-605171 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 0.5kb downstream 0.5kb downstream 500 false scaffold_2: 604672-605171 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 1.0kb upstream 1.0kb upstream 2534 true scaffold_2: 602138-604671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 1.0kb upstream 1.0kb upstream 1000 false scaffold_2: 602138-603137 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 1.0kb downstream 1.0kb downstream 2534 true scaffold_2: 603138-605671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 1.0kb downstream 1.0kb downstream 1000 false scaffold_2: 604672-605671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 2.0kb upstream 2.0kb upstream 3534 true scaffold_2: 601138-604671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 2.0kb upstream 2.0kb upstream 2000 false scaffold_2: 601138-603137 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 2.0kb downstream 2.0kb downstream 3534 true scaffold_2: 603138-606671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 2.0kb downstream 2.0kb downstream 2000 false scaffold_2: 604672-606671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 5.0kb upstream 5.0kb upstream 6534 true scaffold_2: 598138-604671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 5.0kb upstream 5.0kb upstream 5000 false scaffold_2: 598138-603137 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 5.0kb downstream 5.0kb downstream 6534 true scaffold_2: 603138-609671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 5.0kb downstream 5.0kb downstream 5000 false scaffold_2: 604672-609671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 10.0kb upstream 10.0kb upstream 11534 true scaffold_2: 593138-604671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 10.0kb upstream 10.0kb upstream 10000 false scaffold_2: 593138-603137 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 10.0kb downstream 10.0kb downstream 11534 true scaffold_2: 603138-614671 Micromonas pusilla CCMP1545
MicpuC2.est_orfs.2_3807_4269654:2 10.0kb downstream 10.0kb downstream 10000 false scaffold_2: 604672-614671 Micromonas pusilla CCMP1545

2 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124110043 5260 Chlorophyte View MSA
123424698 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier