Gene : DCAR_023041 D. carota v2.0
Defline:  (1 of 1) PF00437 - Type II/IV secretion system protein (T2SSE) Genomic Order:  234
Name:  ? DCAR_023041 Secondary Identifier:  ? PAC:36081944
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
DCAR_023041 0.5kb upstream 0.5kb upstream 2004 true DCARv2_Chr6: 2389647-2391650 Daucus carota
DCAR_023041 0.5kb upstream 0.5kb upstream 500 false DCARv2_Chr6: 2391151-2391650 Daucus carota
DCAR_023041 0.5kb downstream 0.5kb downstream 2004 true DCARv2_Chr6: 2389147-2391150 Daucus carota
DCAR_023041 0.5kb downstream 0.5kb downstream 500 false DCARv2_Chr6: 2389147-2389646 Daucus carota
DCAR_023041 1.0kb upstream 1.0kb upstream 2504 true DCARv2_Chr6: 2389647-2392150 Daucus carota
DCAR_023041 1.0kb upstream 1.0kb upstream 1000 false DCARv2_Chr6: 2391151-2392150 Daucus carota
DCAR_023041 1.0kb downstream 1.0kb downstream 2504 true DCARv2_Chr6: 2388647-2391150 Daucus carota
DCAR_023041 1.0kb downstream 1.0kb downstream 1000 false DCARv2_Chr6: 2388647-2389646 Daucus carota
DCAR_023041 2.0kb upstream 2.0kb upstream 3504 true DCARv2_Chr6: 2389647-2393150 Daucus carota
DCAR_023041 2.0kb upstream 2.0kb upstream 2000 false DCARv2_Chr6: 2391151-2393150 Daucus carota
DCAR_023041 2.0kb downstream 2.0kb downstream 3504 true DCARv2_Chr6: 2387647-2391150 Daucus carota
DCAR_023041 2.0kb downstream 2.0kb downstream 2000 false DCARv2_Chr6: 2387647-2389646 Daucus carota
DCAR_023041 5.0kb upstream 5.0kb upstream 6504 true DCARv2_Chr6: 2389647-2396150 Daucus carota
DCAR_023041 5.0kb upstream 5.0kb upstream 5000 false DCARv2_Chr6: 2391151-2396150 Daucus carota
DCAR_023041 5.0kb downstream 5.0kb downstream 6504 true DCARv2_Chr6: 2384647-2391150 Daucus carota
DCAR_023041 5.0kb downstream 5.0kb downstream 5000 false DCARv2_Chr6: 2384647-2389646 Daucus carota
DCAR_023041 10.0kb upstream 10.0kb upstream 11504 true DCARv2_Chr6: 2389647-2401150 Daucus carota
DCAR_023041 10.0kb upstream 10.0kb upstream 10000 false DCARv2_Chr6: 2391151-2401150 Daucus carota
DCAR_023041 10.0kb downstream 10.0kb downstream 11504 true DCARv2_Chr6: 2379647-2391150 Daucus carota
DCAR_023041 10.0kb downstream 10.0kb downstream 10000 false DCARv2_Chr6: 2379647-2389646 Daucus carota

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121770486 5273 Angiosperm Singleton cluster - no MSA
121462114 5263 Asterids Singleton cluster - no MSA
123727469 5271 Pentapetalae Singleton cluster - no MSA
122761101 5272 Eudicot Singleton cluster - no MSA
121042183 5274 Embryophyte Singleton cluster - no MSA
123082312 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain