Gene : Solyc02g021330.1 S. lycopersicum ITAG2.4
Defline:  (1 of 18) PTHR10252 - HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED Description:  Nuclear transcription factor Y subunit C-1 (AHRD V1 *-*- B6SWV5_MAIZE); contains Interpro domain(s) IPR003958 Transcription factor CBF/NF-Y/archaeal histone
Genomic Order:  298 Name:  ? Solyc02g021330.1
Secondary Identifier:  ? PAC:36158684
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g021330.1 0.5kb upstream 0.5kb upstream 962 true SL2.50ch02: 22485301-22486262 Solanum lycopersicum
Solyc02g021330.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 22485763-22486262 Solanum lycopersicum
Solyc02g021330.1 0.5kb downstream 0.5kb downstream 962 true SL2.50ch02: 22484801-22485762 Solanum lycopersicum
Solyc02g021330.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 22484801-22485300 Solanum lycopersicum
Solyc02g021330.1 1.0kb upstream 1.0kb upstream 1462 true SL2.50ch02: 22485301-22486762 Solanum lycopersicum
Solyc02g021330.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 22485763-22486762 Solanum lycopersicum
Solyc02g021330.1 1.0kb downstream 1.0kb downstream 1462 true SL2.50ch02: 22484301-22485762 Solanum lycopersicum
Solyc02g021330.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 22484301-22485300 Solanum lycopersicum
Solyc02g021330.1 2.0kb upstream 2.0kb upstream 2462 true SL2.50ch02: 22485301-22487762 Solanum lycopersicum
Solyc02g021330.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 22485763-22487762 Solanum lycopersicum
Solyc02g021330.1 2.0kb downstream 2.0kb downstream 2462 true SL2.50ch02: 22483301-22485762 Solanum lycopersicum
Solyc02g021330.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 22483301-22485300 Solanum lycopersicum
Solyc02g021330.1 5.0kb upstream 5.0kb upstream 5462 true SL2.50ch02: 22485301-22490762 Solanum lycopersicum
Solyc02g021330.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 22485763-22490762 Solanum lycopersicum
Solyc02g021330.1 5.0kb downstream 5.0kb downstream 5462 true SL2.50ch02: 22480301-22485762 Solanum lycopersicum
Solyc02g021330.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 22480301-22485300 Solanum lycopersicum
Solyc02g021330.1 10.0kb upstream 10.0kb upstream 10462 true SL2.50ch02: 22485301-22495762 Solanum lycopersicum
Solyc02g021330.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 22485763-22495762 Solanum lycopersicum
Solyc02g021330.1 10.0kb downstream 10.0kb downstream 10462 true SL2.50ch02: 22475301-22485762 Solanum lycopersicum
Solyc02g021330.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 22475301-22485300 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121785725 5273 Angiosperm View MSA
121482798 5263 Asterids View MSA
123758271 5271 Pentapetalae View MSA
122779241 5272 Eudicot View MSA
121057082 5274 Embryophyte View MSA
123096958 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain