Gene : Solyc02g061790.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13215 - RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR Description:  Activated RNA polymerase II transcriptional coactivator p15 (AHRD V1 **** C1BJV8_OSMMO); contains Interpro domain(s) IPR003173 Transcriptional coactivator p15
Genomic Order:  661 Name:  ? Solyc02g061790.2
Secondary Identifier:  ? PAC:36157137
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g061790.2 0.5kb upstream 0.5kb upstream 3769 true SL2.50ch02: 33306382-33310150 Solanum lycopersicum
Solyc02g061790.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 33306382-33306881 Solanum lycopersicum
Solyc02g061790.2 0.5kb downstream 0.5kb downstream 3769 true SL2.50ch02: 33306882-33310650 Solanum lycopersicum
Solyc02g061790.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 33310151-33310650 Solanum lycopersicum
Solyc02g061790.2 1.0kb upstream 1.0kb upstream 4269 true SL2.50ch02: 33305882-33310150 Solanum lycopersicum
Solyc02g061790.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 33305882-33306881 Solanum lycopersicum
Solyc02g061790.2 1.0kb downstream 1.0kb downstream 4269 true SL2.50ch02: 33306882-33311150 Solanum lycopersicum
Solyc02g061790.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 33310151-33311150 Solanum lycopersicum
Solyc02g061790.2 2.0kb upstream 2.0kb upstream 5269 true SL2.50ch02: 33304882-33310150 Solanum lycopersicum
Solyc02g061790.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 33304882-33306881 Solanum lycopersicum
Solyc02g061790.2 2.0kb downstream 2.0kb downstream 5269 true SL2.50ch02: 33306882-33312150 Solanum lycopersicum
Solyc02g061790.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 33310151-33312150 Solanum lycopersicum
Solyc02g061790.2 5.0kb upstream 5.0kb upstream 8269 true SL2.50ch02: 33301882-33310150 Solanum lycopersicum
Solyc02g061790.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 33301882-33306881 Solanum lycopersicum
Solyc02g061790.2 5.0kb downstream 5.0kb downstream 8269 true SL2.50ch02: 33306882-33315150 Solanum lycopersicum
Solyc02g061790.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 33310151-33315150 Solanum lycopersicum
Solyc02g061790.2 10.0kb upstream 10.0kb upstream 13269 true SL2.50ch02: 33296882-33310150 Solanum lycopersicum
Solyc02g061790.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 33296882-33306881 Solanum lycopersicum
Solyc02g061790.2 10.0kb downstream 10.0kb downstream 13269 true SL2.50ch02: 33306882-33320150 Solanum lycopersicum
Solyc02g061790.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 33310151-33320150 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467167 5263 Asterids View MSA
123736875 5271 Pentapetalae View MSA
122796364 5272 Eudicot View MSA
122048027 5273 Angiosperm View MSA
121344440 5274 Embryophyte View MSA
123380043 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain