Gene : Solyc01g090380.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31296:SF1 - UPF0565 PROTEIN C2ORF69 Description:  Os02g0655100 protein (Fragment) (AHRD V1 ***- Q0DZ09_ORYSJ); contains Interpro domain(s) IPR018881 Uncharacterised protein family UPF0565
Genomic Order:  2393 Name:  ? Solyc01g090380.2
Secondary Identifier:  ? PAC:36139953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g090380.2 0.5kb upstream 0.5kb upstream 3011 true SL2.50ch01: 84080146-84083156 Solanum lycopersicum
Solyc01g090380.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 84080146-84080645 Solanum lycopersicum
Solyc01g090380.2 0.5kb downstream 0.5kb downstream 3011 true SL2.50ch01: 84080646-84083656 Solanum lycopersicum
Solyc01g090380.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 84083157-84083656 Solanum lycopersicum
Solyc01g090380.2 1.0kb upstream 1.0kb upstream 3511 true SL2.50ch01: 84079646-84083156 Solanum lycopersicum
Solyc01g090380.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 84079646-84080645 Solanum lycopersicum
Solyc01g090380.2 1.0kb downstream 1.0kb downstream 3511 true SL2.50ch01: 84080646-84084156 Solanum lycopersicum
Solyc01g090380.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 84083157-84084156 Solanum lycopersicum
Solyc01g090380.2 2.0kb upstream 2.0kb upstream 4511 true SL2.50ch01: 84078646-84083156 Solanum lycopersicum
Solyc01g090380.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 84078646-84080645 Solanum lycopersicum
Solyc01g090380.2 2.0kb downstream 2.0kb downstream 4511 true SL2.50ch01: 84080646-84085156 Solanum lycopersicum
Solyc01g090380.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 84083157-84085156 Solanum lycopersicum
Solyc01g090380.2 5.0kb upstream 5.0kb upstream 7511 true SL2.50ch01: 84075646-84083156 Solanum lycopersicum
Solyc01g090380.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 84075646-84080645 Solanum lycopersicum
Solyc01g090380.2 5.0kb downstream 5.0kb downstream 7511 true SL2.50ch01: 84080646-84088156 Solanum lycopersicum
Solyc01g090380.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 84083157-84088156 Solanum lycopersicum
Solyc01g090380.2 10.0kb upstream 10.0kb upstream 12511 true SL2.50ch01: 84070646-84083156 Solanum lycopersicum
Solyc01g090380.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 84070646-84080645 Solanum lycopersicum
Solyc01g090380.2 10.0kb downstream 10.0kb downstream 12511 true SL2.50ch01: 84080646-84093156 Solanum lycopersicum
Solyc01g090380.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 84083157-84093156 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474654 5263 Asterids View MSA
123739442 5271 Pentapetalae View MSA
122787900 5272 Eudicot View MSA
122048933 5273 Angiosperm View MSA
121346083 5274 Embryophyte View MSA
123425579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain