Gene : Solyc05g056070.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K08907 - light-harvesting complex I chlorophyll a/b binding protein 1 (LHCA1) Description:  Chlorophyll a-b binding protein 6A, chloroplastic (AHRD V1 ***- CB11_SOLLC); contains Interpro domain(s) IPR001344 Chlorophyll A-B binding protein
Genomic Order:  2366 Name:  ? Solyc05g056070.2
Secondary Identifier:  ? PAC:36145791
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g056070.2 0.5kb upstream 0.5kb upstream 1902 true SL2.50ch05: 65460127-65462028 Solanum lycopersicum
Solyc05g056070.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65460127-65460626 Solanum lycopersicum
Solyc05g056070.2 0.5kb downstream 0.5kb downstream 1902 true SL2.50ch05: 65460627-65462528 Solanum lycopersicum
Solyc05g056070.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65462029-65462528 Solanum lycopersicum
Solyc05g056070.2 1.0kb upstream 1.0kb upstream 2402 true SL2.50ch05: 65459627-65462028 Solanum lycopersicum
Solyc05g056070.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65459627-65460626 Solanum lycopersicum
Solyc05g056070.2 1.0kb downstream 1.0kb downstream 2402 true SL2.50ch05: 65460627-65463028 Solanum lycopersicum
Solyc05g056070.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65462029-65463028 Solanum lycopersicum
Solyc05g056070.2 2.0kb upstream 2.0kb upstream 3402 true SL2.50ch05: 65458627-65462028 Solanum lycopersicum
Solyc05g056070.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65458627-65460626 Solanum lycopersicum
Solyc05g056070.2 2.0kb downstream 2.0kb downstream 3402 true SL2.50ch05: 65460627-65464028 Solanum lycopersicum
Solyc05g056070.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65462029-65464028 Solanum lycopersicum
Solyc05g056070.2 5.0kb upstream 5.0kb upstream 6402 true SL2.50ch05: 65455627-65462028 Solanum lycopersicum
Solyc05g056070.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65455627-65460626 Solanum lycopersicum
Solyc05g056070.2 5.0kb downstream 5.0kb downstream 6402 true SL2.50ch05: 65460627-65467028 Solanum lycopersicum
Solyc05g056070.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65462029-65467028 Solanum lycopersicum
Solyc05g056070.2 10.0kb upstream 10.0kb upstream 11402 true SL2.50ch05: 65450627-65462028 Solanum lycopersicum
Solyc05g056070.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65450627-65460626 Solanum lycopersicum
Solyc05g056070.2 10.0kb downstream 10.0kb downstream 11402 true SL2.50ch05: 65460627-65472028 Solanum lycopersicum
Solyc05g056070.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65462029-65472028 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466225 5263 Asterids View MSA
123742778 5271 Pentapetalae View MSA
122793443 5272 Eudicot View MSA
122044861 5273 Angiosperm View MSA
121344658 5274 Embryophyte View MSA
123424228 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain