Gene : Solyc05g056060.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) KOG4495 - RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin B Description:  Ubiquitin-like protein (Fragment) (AHRD V1 *-*- A6N0B7_ORYSI); contains Interpro domain(s) IPR000626 Ubiquitin
Genomic Order:  2365 Name:  ? Solyc05g056060.2
Secondary Identifier:  ? PAC:36145497
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g056060.2 0.5kb upstream 0.5kb upstream 7571 true SL2.50ch05: 65454235-65461805 Solanum lycopersicum
Solyc05g056060.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65454235-65454734 Solanum lycopersicum
Solyc05g056060.2 0.5kb downstream 0.5kb downstream 7571 true SL2.50ch05: 65454735-65462305 Solanum lycopersicum
Solyc05g056060.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65461806-65462305 Solanum lycopersicum
Solyc05g056060.2 1.0kb upstream 1.0kb upstream 8071 true SL2.50ch05: 65453735-65461805 Solanum lycopersicum
Solyc05g056060.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65453735-65454734 Solanum lycopersicum
Solyc05g056060.2 1.0kb downstream 1.0kb downstream 8071 true SL2.50ch05: 65454735-65462805 Solanum lycopersicum
Solyc05g056060.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65461806-65462805 Solanum lycopersicum
Solyc05g056060.2 2.0kb upstream 2.0kb upstream 9071 true SL2.50ch05: 65452735-65461805 Solanum lycopersicum
Solyc05g056060.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65452735-65454734 Solanum lycopersicum
Solyc05g056060.2 2.0kb downstream 2.0kb downstream 9071 true SL2.50ch05: 65454735-65463805 Solanum lycopersicum
Solyc05g056060.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65461806-65463805 Solanum lycopersicum
Solyc05g056060.2 5.0kb upstream 5.0kb upstream 12071 true SL2.50ch05: 65449735-65461805 Solanum lycopersicum
Solyc05g056060.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65449735-65454734 Solanum lycopersicum
Solyc05g056060.2 5.0kb downstream 5.0kb downstream 12071 true SL2.50ch05: 65454735-65466805 Solanum lycopersicum
Solyc05g056060.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65461806-65466805 Solanum lycopersicum
Solyc05g056060.2 10.0kb upstream 10.0kb upstream 17071 true SL2.50ch05: 65444735-65461805 Solanum lycopersicum
Solyc05g056060.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65444735-65454734 Solanum lycopersicum
Solyc05g056060.2 10.0kb downstream 10.0kb downstream 17071 true SL2.50ch05: 65454735-65471805 Solanum lycopersicum
Solyc05g056060.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65461806-65471805 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041259 5273 Angiosperm View MSA
121471817 5263 Asterids View MSA
123745453 5271 Pentapetalae View MSA
122793861 5272 Eudicot View MSA
121350685 5274 Embryophyte View MSA
123425021 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain