Gene : Solyc05g054710.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR22600:SF16 - BETA-HEXOSAMINIDASE 1 Description:  Beta-hexosaminidase b (AHRD V1 **** Q17BL1_AEDAE); contains Interpro domain(s) IPR001540 Glycoside hydrolase, family 20
Genomic Order:  2230 Name:  ? Solyc05g054710.2
Secondary Identifier:  ? PAC:36145125
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6902 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g054710.2 0.5kb upstream 0.5kb upstream 10237 true SL2.50ch05: 64565086-64575322 Solanum lycopersicum
Solyc05g054710.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 64574823-64575322 Solanum lycopersicum
Solyc05g054710.2 0.5kb downstream 0.5kb downstream 10237 true SL2.50ch05: 64564586-64574822 Solanum lycopersicum
Solyc05g054710.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 64564586-64565085 Solanum lycopersicum
Solyc05g054710.2 1.0kb upstream 1.0kb upstream 10737 true SL2.50ch05: 64565086-64575822 Solanum lycopersicum
Solyc05g054710.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 64574823-64575822 Solanum lycopersicum
Solyc05g054710.2 1.0kb downstream 1.0kb downstream 10737 true SL2.50ch05: 64564086-64574822 Solanum lycopersicum
Solyc05g054710.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 64564086-64565085 Solanum lycopersicum
Solyc05g054710.2 2.0kb upstream 2.0kb upstream 11737 true SL2.50ch05: 64565086-64576822 Solanum lycopersicum
Solyc05g054710.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 64574823-64576822 Solanum lycopersicum
Solyc05g054710.2 2.0kb downstream 2.0kb downstream 11737 true SL2.50ch05: 64563086-64574822 Solanum lycopersicum
Solyc05g054710.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 64563086-64565085 Solanum lycopersicum
Solyc05g054710.2 5.0kb upstream 5.0kb upstream 14737 true SL2.50ch05: 64565086-64579822 Solanum lycopersicum
Solyc05g054710.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 64574823-64579822 Solanum lycopersicum
Solyc05g054710.2 5.0kb downstream 5.0kb downstream 14737 true SL2.50ch05: 64560086-64574822 Solanum lycopersicum
Solyc05g054710.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 64560086-64565085 Solanum lycopersicum
Solyc05g054710.2 10.0kb upstream 10.0kb upstream 19737 true SL2.50ch05: 64565086-64584822 Solanum lycopersicum
Solyc05g054710.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 64574823-64584822 Solanum lycopersicum
Solyc05g054710.2 10.0kb downstream 10.0kb downstream 19737 true SL2.50ch05: 64555086-64574822 Solanum lycopersicum
Solyc05g054710.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 64555086-64565085 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475799 5263 Asterids View MSA
123738133 5271 Pentapetalae View MSA
122790534 5272 Eudicot View MSA
122047167 5273 Angiosperm View MSA
121346826 5274 Embryophyte View MSA
123428053 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain