Gene : Solyc05g055090.2 S. lycopersicum ITAG2.4
Defline:  (1 of 6) K11838 - ubiquitin carboxyl-terminal hydrolase 7 (USP7, UBP15) Description:  Ubiquitin carboxyl-terminal hydrolase family protein expressed (AHRD V1 **** Q2R2A3_ORYSJ); contains Interpro domain(s) IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Genomic Order:  2268 Name:  ? Solyc05g055090.2
Secondary Identifier:  ? PAC:36146150
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g055090.2 0.5kb upstream 0.5kb upstream 18704 true SL2.50ch05: 64872981-64891684 Solanum lycopersicum
Solyc05g055090.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 64891185-64891684 Solanum lycopersicum
Solyc05g055090.2 0.5kb downstream 0.5kb downstream 18704 true SL2.50ch05: 64872481-64891184 Solanum lycopersicum
Solyc05g055090.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 64872481-64872980 Solanum lycopersicum
Solyc05g055090.2 1.0kb upstream 1.0kb upstream 19204 true SL2.50ch05: 64872981-64892184 Solanum lycopersicum
Solyc05g055090.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 64891185-64892184 Solanum lycopersicum
Solyc05g055090.2 1.0kb downstream 1.0kb downstream 19204 true SL2.50ch05: 64871981-64891184 Solanum lycopersicum
Solyc05g055090.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 64871981-64872980 Solanum lycopersicum
Solyc05g055090.2 2.0kb upstream 2.0kb upstream 20204 true SL2.50ch05: 64872981-64893184 Solanum lycopersicum
Solyc05g055090.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 64891185-64893184 Solanum lycopersicum
Solyc05g055090.2 2.0kb downstream 2.0kb downstream 20204 true SL2.50ch05: 64870981-64891184 Solanum lycopersicum
Solyc05g055090.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 64870981-64872980 Solanum lycopersicum
Solyc05g055090.2 5.0kb upstream 5.0kb upstream 23204 true SL2.50ch05: 64872981-64896184 Solanum lycopersicum
Solyc05g055090.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 64891185-64896184 Solanum lycopersicum
Solyc05g055090.2 5.0kb downstream 5.0kb downstream 23204 true SL2.50ch05: 64867981-64891184 Solanum lycopersicum
Solyc05g055090.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 64867981-64872980 Solanum lycopersicum
Solyc05g055090.2 10.0kb upstream 10.0kb upstream 28204 true SL2.50ch05: 64872981-64901184 Solanum lycopersicum
Solyc05g055090.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 64891185-64901184 Solanum lycopersicum
Solyc05g055090.2 10.0kb downstream 10.0kb downstream 28204 true SL2.50ch05: 64862981-64891184 Solanum lycopersicum
Solyc05g055090.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 64862981-64872980 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477298 5263 Asterids View MSA
123746914 5271 Pentapetalae View MSA
122788764 5272 Eudicot View MSA
122042201 5273 Angiosperm View MSA
121346231 5274 Embryophyte View MSA
123427549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain