Gene : Solyc01g090710.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K00025 - malate dehydrogenase (MDH1) Description:  Malate dehydrogenase, cytoplasmic (AHRD V1 **** MDHC_ORYSJ); contains Interpro domain(s) IPR011274 Malate dehydrogenase, NAD-dependent, cytosolic
Genomic Order:  2426 Name:  ? Solyc01g090710.2
Secondary Identifier:  ? PAC:36139933
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum GLYOXYLATE-BYPASS Solanum lycopersicum pathologic  
Slycopersicum PWY-5464 Solanum lycopersicum pathologic  
Slycopersicum PWY-561 Solanum lycopersicum pathologic  
Slycopersicum PWY-5690 Solanum lycopersicum pathologic  
Slycopersicum PWY-7115 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g090710.2 0.5kb upstream 0.5kb upstream 3187 true SL2.50ch01: 84349417-84352603 Solanum lycopersicum
Solyc01g090710.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 84349417-84349916 Solanum lycopersicum
Solyc01g090710.2 0.5kb downstream 0.5kb downstream 3187 true SL2.50ch01: 84349917-84353103 Solanum lycopersicum
Solyc01g090710.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 84352604-84353103 Solanum lycopersicum
Solyc01g090710.2 1.0kb upstream 1.0kb upstream 3687 true SL2.50ch01: 84348917-84352603 Solanum lycopersicum
Solyc01g090710.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 84348917-84349916 Solanum lycopersicum
Solyc01g090710.2 1.0kb downstream 1.0kb downstream 3687 true SL2.50ch01: 84349917-84353603 Solanum lycopersicum
Solyc01g090710.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 84352604-84353603 Solanum lycopersicum
Solyc01g090710.2 2.0kb upstream 2.0kb upstream 4687 true SL2.50ch01: 84347917-84352603 Solanum lycopersicum
Solyc01g090710.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 84347917-84349916 Solanum lycopersicum
Solyc01g090710.2 2.0kb downstream 2.0kb downstream 4687 true SL2.50ch01: 84349917-84354603 Solanum lycopersicum
Solyc01g090710.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 84352604-84354603 Solanum lycopersicum
Solyc01g090710.2 5.0kb upstream 5.0kb upstream 7687 true SL2.50ch01: 84344917-84352603 Solanum lycopersicum
Solyc01g090710.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 84344917-84349916 Solanum lycopersicum
Solyc01g090710.2 5.0kb downstream 5.0kb downstream 7687 true SL2.50ch01: 84349917-84357603 Solanum lycopersicum
Solyc01g090710.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 84352604-84357603 Solanum lycopersicum
Solyc01g090710.2 10.0kb upstream 10.0kb upstream 12687 true SL2.50ch01: 84339917-84352603 Solanum lycopersicum
Solyc01g090710.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 84339917-84349916 Solanum lycopersicum
Solyc01g090710.2 10.0kb downstream 10.0kb downstream 12687 true SL2.50ch01: 84349917-84362603 Solanum lycopersicum
Solyc01g090710.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 84352604-84362603 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121414715 5263 Asterids View MSA
123746984 5271 Pentapetalae View MSA
122786587 5272 Eudicot View MSA
122050336 5273 Angiosperm View MSA
121345674 5274 Embryophyte View MSA
123426378 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain