Gene : Solyc02g014090.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR20932:SF8 - PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN Description:  LysM domain containing protein expressed (AHRD V1 ***- Q7XD97_ORYSJ); contains Interpro domain(s) IPR002482 Peptidoglycan-binding Lysin subgroup
Genomic Order:  173 Name:  ? Solyc02g014090.2
Secondary Identifier:  ? PAC:36159050
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g014090.2 0.5kb upstream 0.5kb upstream 3487 true SL2.50ch02: 15081199-15084685 Solanum lycopersicum
Solyc02g014090.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 15081199-15081698 Solanum lycopersicum
Solyc02g014090.2 0.5kb downstream 0.5kb downstream 3487 true SL2.50ch02: 15081699-15085185 Solanum lycopersicum
Solyc02g014090.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 15084686-15085185 Solanum lycopersicum
Solyc02g014090.2 1.0kb upstream 1.0kb upstream 3987 true SL2.50ch02: 15080699-15084685 Solanum lycopersicum
Solyc02g014090.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 15080699-15081698 Solanum lycopersicum
Solyc02g014090.2 1.0kb downstream 1.0kb downstream 3987 true SL2.50ch02: 15081699-15085685 Solanum lycopersicum
Solyc02g014090.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 15084686-15085685 Solanum lycopersicum
Solyc02g014090.2 2.0kb upstream 2.0kb upstream 4987 true SL2.50ch02: 15079699-15084685 Solanum lycopersicum
Solyc02g014090.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 15079699-15081698 Solanum lycopersicum
Solyc02g014090.2 2.0kb downstream 2.0kb downstream 4987 true SL2.50ch02: 15081699-15086685 Solanum lycopersicum
Solyc02g014090.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 15084686-15086685 Solanum lycopersicum
Solyc02g014090.2 5.0kb upstream 5.0kb upstream 7987 true SL2.50ch02: 15076699-15084685 Solanum lycopersicum
Solyc02g014090.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 15076699-15081698 Solanum lycopersicum
Solyc02g014090.2 5.0kb downstream 5.0kb downstream 7987 true SL2.50ch02: 15081699-15089685 Solanum lycopersicum
Solyc02g014090.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 15084686-15089685 Solanum lycopersicum
Solyc02g014090.2 10.0kb upstream 10.0kb upstream 12987 true SL2.50ch02: 15071699-15084685 Solanum lycopersicum
Solyc02g014090.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 15071699-15081698 Solanum lycopersicum
Solyc02g014090.2 10.0kb downstream 10.0kb downstream 12987 true SL2.50ch02: 15081699-15094685 Solanum lycopersicum
Solyc02g014090.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 15084686-15094685 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040928 5273 Angiosperm View MSA
121469208 5263 Asterids View MSA
123744886 5271 Pentapetalae View MSA
122793061 5272 Eudicot View MSA
121350889 5274 Embryophyte View MSA
123426344 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain