Gene : Solyc02g021000.2 S. lycopersicum ITAG2.4

Defline:  (1 of 1) PTHR33219:SF1 - COFACTOR ASSEMBLY, COMPLEX C (B6F) Description:  YGGT family conserved hypothetical integral membrane protein (AHRD V1 *-*- A4CQQ7_SYNPV); contains Interpro domain(s) IPR003425 Protein of unknown function YGGT
Genomic Order:  265 Name:  ? Solyc02g021000.2
Secondary Identifier:  ? PAC:36159231

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g021000.2 0.5kb upstream 0.5kb upstream 2096 true SL2.50ch02: 21269751-21271846 Solanum lycopersicum
Solyc02g021000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 21271347-21271846 Solanum lycopersicum
Solyc02g021000.2 0.5kb downstream 0.5kb downstream 2096 true SL2.50ch02: 21269251-21271346 Solanum lycopersicum
Solyc02g021000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 21269251-21269750 Solanum lycopersicum
Solyc02g021000.2 1.0kb upstream 1.0kb upstream 2596 true SL2.50ch02: 21269751-21272346 Solanum lycopersicum
Solyc02g021000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 21271347-21272346 Solanum lycopersicum
Solyc02g021000.2 1.0kb downstream 1.0kb downstream 2596 true SL2.50ch02: 21268751-21271346 Solanum lycopersicum
Solyc02g021000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 21268751-21269750 Solanum lycopersicum
Solyc02g021000.2 2.0kb upstream 2.0kb upstream 3596 true SL2.50ch02: 21269751-21273346 Solanum lycopersicum
Solyc02g021000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 21271347-21273346 Solanum lycopersicum
Solyc02g021000.2 2.0kb downstream 2.0kb downstream 3596 true SL2.50ch02: 21267751-21271346 Solanum lycopersicum
Solyc02g021000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 21267751-21269750 Solanum lycopersicum
Solyc02g021000.2 5.0kb upstream 5.0kb upstream 6596 true SL2.50ch02: 21269751-21276346 Solanum lycopersicum
Solyc02g021000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 21271347-21276346 Solanum lycopersicum
Solyc02g021000.2 5.0kb downstream 5.0kb downstream 6596 true SL2.50ch02: 21264751-21271346 Solanum lycopersicum
Solyc02g021000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 21264751-21269750 Solanum lycopersicum
Solyc02g021000.2 10.0kb upstream 10.0kb upstream 11596 true SL2.50ch02: 21269751-21281346 Solanum lycopersicum
Solyc02g021000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 21271347-21281346 Solanum lycopersicum
Solyc02g021000.2 10.0kb downstream 10.0kb downstream 11596 true SL2.50ch02: 21259751-21271346 Solanum lycopersicum
Solyc02g021000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 21259751-21269750 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481071 5263 Asterids View MSA
123749054 5271 Pentapetalae View MSA
122791732 5272 Eudicot View MSA
122048332 5273 Angiosperm View MSA
121348595 5274 Embryophyte View MSA
123428591 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain