Gene : Solyc02g020980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.4.1.25 - 4-alpha-glucanotransferase / Oligo-1,4-1,4-glucantransferase Description:  4-alpha-glucanotransferase (AHRD V1 **** Q6R608_SOLTU); contains Interpro domain(s) IPR003385 Glycoside hydrolase, family 77
Genomic Order:  263 Name:  ? Solyc02g020980.2
Secondary Identifier:  ? PAC:36156709
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-6724 Solanum lycopersicum pathologic  
Slycopersicum PWY-7238 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g020980.2 0.5kb upstream 0.5kb upstream 42249 true SL2.50ch02: 20819233-20861481 Solanum lycopersicum
Solyc02g020980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 20860982-20861481 Solanum lycopersicum
Solyc02g020980.2 0.5kb downstream 0.5kb downstream 42249 true SL2.50ch02: 20818733-20860981 Solanum lycopersicum
Solyc02g020980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 20818733-20819232 Solanum lycopersicum
Solyc02g020980.2 1.0kb upstream 1.0kb upstream 42749 true SL2.50ch02: 20819233-20861981 Solanum lycopersicum
Solyc02g020980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 20860982-20861981 Solanum lycopersicum
Solyc02g020980.2 1.0kb downstream 1.0kb downstream 42749 true SL2.50ch02: 20818233-20860981 Solanum lycopersicum
Solyc02g020980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 20818233-20819232 Solanum lycopersicum
Solyc02g020980.2 2.0kb upstream 2.0kb upstream 43749 true SL2.50ch02: 20819233-20862981 Solanum lycopersicum
Solyc02g020980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 20860982-20862981 Solanum lycopersicum
Solyc02g020980.2 2.0kb downstream 2.0kb downstream 43749 true SL2.50ch02: 20817233-20860981 Solanum lycopersicum
Solyc02g020980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 20817233-20819232 Solanum lycopersicum
Solyc02g020980.2 5.0kb upstream 5.0kb upstream 46749 true SL2.50ch02: 20819233-20865981 Solanum lycopersicum
Solyc02g020980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 20860982-20865981 Solanum lycopersicum
Solyc02g020980.2 5.0kb downstream 5.0kb downstream 46749 true SL2.50ch02: 20814233-20860981 Solanum lycopersicum
Solyc02g020980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 20814233-20819232 Solanum lycopersicum
Solyc02g020980.2 10.0kb upstream 10.0kb upstream 51749 true SL2.50ch02: 20819233-20870981 Solanum lycopersicum
Solyc02g020980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 20860982-20870981 Solanum lycopersicum
Solyc02g020980.2 10.0kb downstream 10.0kb downstream 51749 true SL2.50ch02: 20809233-20860981 Solanum lycopersicum
Solyc02g020980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 20809233-20819232 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466593 5263 Asterids View MSA
123736584 5271 Pentapetalae View MSA
122793491 5272 Eudicot View MSA
122045486 5273 Angiosperm View MSA
121345018 5274 Embryophyte View MSA
123425111 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain