Gene : Solyc05g056620.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11945:SF218 - MADS-BOX PROTEIN AGL79 Description:  Macrocalyx (mc) Myocyte-specific enhancer factor 2D (AHRD V1 *-*- MEF2D_HUMAN); contains Interpro domain(s) IPR002100 Transcription factor, MADS-box IPR002487 Transcription factor, K-box
Genomic Order:  601 Name:  ? Solyc05g056620.1
Secondary Identifier:  ? PAC:36146321
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g056620.1 0.5kb upstream 0.5kb upstream 10129 true SL2.50ch05: 5216722-5226850 Solanum lycopersicum
Solyc05g056620.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 5226351-5226850 Solanum lycopersicum
Solyc05g056620.1 0.5kb downstream 0.5kb downstream 10129 true SL2.50ch05: 5216222-5226350 Solanum lycopersicum
Solyc05g056620.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 5216222-5216721 Solanum lycopersicum
Solyc05g056620.1 1.0kb upstream 1.0kb upstream 10629 true SL2.50ch05: 5216722-5227350 Solanum lycopersicum
Solyc05g056620.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 5226351-5227350 Solanum lycopersicum
Solyc05g056620.1 1.0kb downstream 1.0kb downstream 10629 true SL2.50ch05: 5215722-5226350 Solanum lycopersicum
Solyc05g056620.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 5215722-5216721 Solanum lycopersicum
Solyc05g056620.1 2.0kb upstream 2.0kb upstream 11629 true SL2.50ch05: 5216722-5228350 Solanum lycopersicum
Solyc05g056620.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 5226351-5228350 Solanum lycopersicum
Solyc05g056620.1 2.0kb downstream 2.0kb downstream 11629 true SL2.50ch05: 5214722-5226350 Solanum lycopersicum
Solyc05g056620.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 5214722-5216721 Solanum lycopersicum
Solyc05g056620.1 5.0kb upstream 5.0kb upstream 14629 true SL2.50ch05: 5216722-5231350 Solanum lycopersicum
Solyc05g056620.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 5226351-5231350 Solanum lycopersicum
Solyc05g056620.1 5.0kb downstream 5.0kb downstream 14629 true SL2.50ch05: 5211722-5226350 Solanum lycopersicum
Solyc05g056620.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 5211722-5216721 Solanum lycopersicum
Solyc05g056620.1 10.0kb upstream 10.0kb upstream 19629 true SL2.50ch05: 5216722-5236350 Solanum lycopersicum
Solyc05g056620.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 5226351-5236350 Solanum lycopersicum
Solyc05g056620.1 10.0kb downstream 10.0kb downstream 19629 true SL2.50ch05: 5206722-5226350 Solanum lycopersicum
Solyc05g056620.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 5206722-5216721 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
121480975 5263 Asterids View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain