Gene : Solyc05g056480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K00166 - 2-oxoisovalerate dehydrogenase E1 component alpha subunit (BCKDHA, bkdA1) Description:  Pyruvate dehydrogenase E1 component alpha subunit (AHRD V1 **** D6YUM5_WADCW); contains Interpro domain(s) IPR001017 Dehydrogenase, E1 component
Genomic Order:  2407 Name:  ? Solyc05g056480.2
Secondary Identifier:  ? PAC:36146495
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5046 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g056480.2 0.5kb upstream 0.5kb upstream 4473 true SL2.50ch05: 65756188-65760660 Solanum lycopersicum
Solyc05g056480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65756188-65756687 Solanum lycopersicum
Solyc05g056480.2 0.5kb downstream 0.5kb downstream 4473 true SL2.50ch05: 65756688-65761160 Solanum lycopersicum
Solyc05g056480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65760661-65761160 Solanum lycopersicum
Solyc05g056480.2 1.0kb upstream 1.0kb upstream 4973 true SL2.50ch05: 65755688-65760660 Solanum lycopersicum
Solyc05g056480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65755688-65756687 Solanum lycopersicum
Solyc05g056480.2 1.0kb downstream 1.0kb downstream 4973 true SL2.50ch05: 65756688-65761660 Solanum lycopersicum
Solyc05g056480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65760661-65761660 Solanum lycopersicum
Solyc05g056480.2 2.0kb upstream 2.0kb upstream 5973 true SL2.50ch05: 65754688-65760660 Solanum lycopersicum
Solyc05g056480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65754688-65756687 Solanum lycopersicum
Solyc05g056480.2 2.0kb downstream 2.0kb downstream 5973 true SL2.50ch05: 65756688-65762660 Solanum lycopersicum
Solyc05g056480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65760661-65762660 Solanum lycopersicum
Solyc05g056480.2 5.0kb upstream 5.0kb upstream 8973 true SL2.50ch05: 65751688-65760660 Solanum lycopersicum
Solyc05g056480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65751688-65756687 Solanum lycopersicum
Solyc05g056480.2 5.0kb downstream 5.0kb downstream 8973 true SL2.50ch05: 65756688-65765660 Solanum lycopersicum
Solyc05g056480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65760661-65765660 Solanum lycopersicum
Solyc05g056480.2 10.0kb upstream 10.0kb upstream 13973 true SL2.50ch05: 65746688-65760660 Solanum lycopersicum
Solyc05g056480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65746688-65756687 Solanum lycopersicum
Solyc05g056480.2 10.0kb downstream 10.0kb downstream 13973 true SL2.50ch05: 65756688-65770660 Solanum lycopersicum
Solyc05g056480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65760661-65770660 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481735 5263 Asterids View MSA
123750640 5271 Pentapetalae View MSA
122791863 5272 Eudicot View MSA
122044172 5273 Angiosperm View MSA
121346270 5274 Embryophyte View MSA
123428672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain