Gene : Solyc05g056320.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PF01713//PF08590 - Smr domain (Smr) // Domain of unknown function (DUF1771) (DUF1771) Description:  CCCH zinc finger and SMR domain-containing protein (AHRD V1 *--- C1G3N1_PARBD); contains Interpro domain(s) IPR002625 Smr protein/MutS2 C-terminal
Genomic Order:  2391 Name:  ? Solyc05g056320.2
Secondary Identifier:  ? PAC:36145795
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g056320.2 0.5kb upstream 0.5kb upstream 3990 true SL2.50ch05: 65654264-65658253 Solanum lycopersicum
Solyc05g056320.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 65657754-65658253 Solanum lycopersicum
Solyc05g056320.2 0.5kb downstream 0.5kb downstream 3990 true SL2.50ch05: 65653764-65657753 Solanum lycopersicum
Solyc05g056320.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 65653764-65654263 Solanum lycopersicum
Solyc05g056320.2 1.0kb upstream 1.0kb upstream 4490 true SL2.50ch05: 65654264-65658753 Solanum lycopersicum
Solyc05g056320.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 65657754-65658753 Solanum lycopersicum
Solyc05g056320.2 1.0kb downstream 1.0kb downstream 4490 true SL2.50ch05: 65653264-65657753 Solanum lycopersicum
Solyc05g056320.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 65653264-65654263 Solanum lycopersicum
Solyc05g056320.2 2.0kb upstream 2.0kb upstream 5490 true SL2.50ch05: 65654264-65659753 Solanum lycopersicum
Solyc05g056320.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 65657754-65659753 Solanum lycopersicum
Solyc05g056320.2 2.0kb downstream 2.0kb downstream 5490 true SL2.50ch05: 65652264-65657753 Solanum lycopersicum
Solyc05g056320.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 65652264-65654263 Solanum lycopersicum
Solyc05g056320.2 5.0kb upstream 5.0kb upstream 8490 true SL2.50ch05: 65654264-65662753 Solanum lycopersicum
Solyc05g056320.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 65657754-65662753 Solanum lycopersicum
Solyc05g056320.2 5.0kb downstream 5.0kb downstream 8490 true SL2.50ch05: 65649264-65657753 Solanum lycopersicum
Solyc05g056320.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 65649264-65654263 Solanum lycopersicum
Solyc05g056320.2 10.0kb upstream 10.0kb upstream 13490 true SL2.50ch05: 65654264-65667753 Solanum lycopersicum
Solyc05g056320.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 65657754-65667753 Solanum lycopersicum
Solyc05g056320.2 10.0kb downstream 10.0kb downstream 13490 true SL2.50ch05: 65644264-65657753 Solanum lycopersicum
Solyc05g056320.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 65644264-65654263 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026433 5273 Angiosperm View MSA
121477770 5263 Asterids View MSA
123738985 5271 Pentapetalae View MSA
122791579 5272 Eudicot View MSA
121344234 5274 Embryophyte View MSA
123380011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain