Gene : Solyc01g090670.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14306 - nuclear pore complex protein Nup62 (NUP62, NSP1) Description:  Nuclear pore glycoprotein p62 (AHRD V1 *--- C0HBQ2_SALSA); contains Interpro domain(s) IPR007758 Nucleoporin, Nsp1-like, C-terminal
Genomic Order:  2422 Name:  ? Solyc01g090670.2
Secondary Identifier:  ? PAC:36140770
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g090670.2 0.5kb upstream 0.5kb upstream 10828 true SL2.50ch01: 84314959-84325786 Solanum lycopersicum
Solyc01g090670.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 84314959-84315458 Solanum lycopersicum
Solyc01g090670.2 0.5kb downstream 0.5kb downstream 10828 true SL2.50ch01: 84315459-84326286 Solanum lycopersicum
Solyc01g090670.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 84325787-84326286 Solanum lycopersicum
Solyc01g090670.2 1.0kb upstream 1.0kb upstream 11328 true SL2.50ch01: 84314459-84325786 Solanum lycopersicum
Solyc01g090670.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 84314459-84315458 Solanum lycopersicum
Solyc01g090670.2 1.0kb downstream 1.0kb downstream 11328 true SL2.50ch01: 84315459-84326786 Solanum lycopersicum
Solyc01g090670.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 84325787-84326786 Solanum lycopersicum
Solyc01g090670.2 2.0kb upstream 2.0kb upstream 12328 true SL2.50ch01: 84313459-84325786 Solanum lycopersicum
Solyc01g090670.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 84313459-84315458 Solanum lycopersicum
Solyc01g090670.2 2.0kb downstream 2.0kb downstream 12328 true SL2.50ch01: 84315459-84327786 Solanum lycopersicum
Solyc01g090670.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 84325787-84327786 Solanum lycopersicum
Solyc01g090670.2 5.0kb upstream 5.0kb upstream 15328 true SL2.50ch01: 84310459-84325786 Solanum lycopersicum
Solyc01g090670.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 84310459-84315458 Solanum lycopersicum
Solyc01g090670.2 5.0kb downstream 5.0kb downstream 15328 true SL2.50ch01: 84315459-84330786 Solanum lycopersicum
Solyc01g090670.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 84325787-84330786 Solanum lycopersicum
Solyc01g090670.2 10.0kb upstream 10.0kb upstream 20328 true SL2.50ch01: 84305459-84325786 Solanum lycopersicum
Solyc01g090670.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 84305459-84315458 Solanum lycopersicum
Solyc01g090670.2 10.0kb downstream 10.0kb downstream 20328 true SL2.50ch01: 84315459-84335786 Solanum lycopersicum
Solyc01g090670.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 84325787-84335786 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477671 5263 Asterids View MSA
123740016 5271 Pentapetalae View MSA
122794564 5272 Eudicot View MSA
122044271 5273 Angiosperm View MSA
121348594 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain