Gene : Solyc05g052540.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR32285:SF10 - PROTEIN ESKIMO 1 Description:  Os03g0291800 protein (Fragment) (AHRD V1 **-- Q0DSS4_ORYSJ); contains Interpro domain(s) IPR004253 Protein of unknown function DUF231, plant
Genomic Order:  2015 Name:  ? Solyc05g052540.1
Secondary Identifier:  ? PAC:36144413
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g052540.1 0.5kb upstream 0.5kb upstream 5035 true SL2.50ch05: 62764269-62769303 Solanum lycopersicum
Solyc05g052540.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 62768804-62769303 Solanum lycopersicum
Solyc05g052540.1 0.5kb downstream 0.5kb downstream 5035 true SL2.50ch05: 62763769-62768803 Solanum lycopersicum
Solyc05g052540.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 62763769-62764268 Solanum lycopersicum
Solyc05g052540.1 1.0kb upstream 1.0kb upstream 5535 true SL2.50ch05: 62764269-62769803 Solanum lycopersicum
Solyc05g052540.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 62768804-62769803 Solanum lycopersicum
Solyc05g052540.1 1.0kb downstream 1.0kb downstream 5535 true SL2.50ch05: 62763269-62768803 Solanum lycopersicum
Solyc05g052540.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 62763269-62764268 Solanum lycopersicum
Solyc05g052540.1 2.0kb upstream 2.0kb upstream 6535 true SL2.50ch05: 62764269-62770803 Solanum lycopersicum
Solyc05g052540.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 62768804-62770803 Solanum lycopersicum
Solyc05g052540.1 2.0kb downstream 2.0kb downstream 6535 true SL2.50ch05: 62762269-62768803 Solanum lycopersicum
Solyc05g052540.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 62762269-62764268 Solanum lycopersicum
Solyc05g052540.1 5.0kb upstream 5.0kb upstream 9535 true SL2.50ch05: 62764269-62773803 Solanum lycopersicum
Solyc05g052540.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 62768804-62773803 Solanum lycopersicum
Solyc05g052540.1 5.0kb downstream 5.0kb downstream 9535 true SL2.50ch05: 62759269-62768803 Solanum lycopersicum
Solyc05g052540.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 62759269-62764268 Solanum lycopersicum
Solyc05g052540.1 10.0kb upstream 10.0kb upstream 14535 true SL2.50ch05: 62764269-62778803 Solanum lycopersicum
Solyc05g052540.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 62768804-62778803 Solanum lycopersicum
Solyc05g052540.1 10.0kb downstream 10.0kb downstream 14535 true SL2.50ch05: 62754269-62768803 Solanum lycopersicum
Solyc05g052540.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 62754269-62764268 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121367454 5263 Asterids Singleton cluster - no MSA
123757708 5271 Pentapetalae View MSA
122778727 5272 Eudicot View MSA
122051004 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121312244 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain