Gene : Solyc01g088800.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR24012:SF493 - RNA-BINDING PROTEIN 28 Description:  Polyadenylate-binding protein (AHRD V1 *--- C1GL98_PARBD); contains Interpro domain(s) IPR000504 RNA recognition motif, RNP-1
Genomic Order:  2334 Name:  ? Solyc01g088800.2
Secondary Identifier:  ? PAC:36140722
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g088800.2 0.5kb upstream 0.5kb upstream 5862 true SL2.50ch01: 83536998-83542859 Solanum lycopersicum
Solyc01g088800.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 83536998-83537497 Solanum lycopersicum
Solyc01g088800.2 0.5kb downstream 0.5kb downstream 5862 true SL2.50ch01: 83537498-83543359 Solanum lycopersicum
Solyc01g088800.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 83542860-83543359 Solanum lycopersicum
Solyc01g088800.2 1.0kb upstream 1.0kb upstream 6362 true SL2.50ch01: 83536498-83542859 Solanum lycopersicum
Solyc01g088800.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 83536498-83537497 Solanum lycopersicum
Solyc01g088800.2 1.0kb downstream 1.0kb downstream 6362 true SL2.50ch01: 83537498-83543859 Solanum lycopersicum
Solyc01g088800.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 83542860-83543859 Solanum lycopersicum
Solyc01g088800.2 2.0kb upstream 2.0kb upstream 7362 true SL2.50ch01: 83535498-83542859 Solanum lycopersicum
Solyc01g088800.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 83535498-83537497 Solanum lycopersicum
Solyc01g088800.2 2.0kb downstream 2.0kb downstream 7362 true SL2.50ch01: 83537498-83544859 Solanum lycopersicum
Solyc01g088800.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 83542860-83544859 Solanum lycopersicum
Solyc01g088800.2 5.0kb upstream 5.0kb upstream 10362 true SL2.50ch01: 83532498-83542859 Solanum lycopersicum
Solyc01g088800.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 83532498-83537497 Solanum lycopersicum
Solyc01g088800.2 5.0kb downstream 5.0kb downstream 10362 true SL2.50ch01: 83537498-83547859 Solanum lycopersicum
Solyc01g088800.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 83542860-83547859 Solanum lycopersicum
Solyc01g088800.2 10.0kb upstream 10.0kb upstream 15362 true SL2.50ch01: 83527498-83542859 Solanum lycopersicum
Solyc01g088800.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 83527498-83537497 Solanum lycopersicum
Solyc01g088800.2 10.0kb downstream 10.0kb downstream 15362 true SL2.50ch01: 83537498-83552859 Solanum lycopersicum
Solyc01g088800.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 83542860-83552859 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041174 5273 Angiosperm View MSA
121385882 5263 Asterids View MSA
123750453 5271 Pentapetalae View MSA
122797248 5272 Eudicot View MSA
123429142 5275 Viridiplantae View MSA
121349565 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain