Gene : Solyc05g052760.2 S. lycopersicum ITAG2.4
Defline:  (1 of 7) K05857 - phosphatidylinositol phospholipase C, delta (PLCD) Description:  1-phosphatidylinositol-4 5-bisphosphate phosphodiesterase (AHRD V1 ***- O49902_NICRU); contains Interpro domain(s) IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
Genomic Order:  2036 Name:  ? Solyc05g052760.2
Secondary Identifier:  ? PAC:36144231
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPASYN-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-6351 Solanum lycopersicum pathologic  
Slycopersicum PWY-6367 Solanum lycopersicum pathologic  
Slycopersicum PWY-7039 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g052760.2 0.5kb upstream 0.5kb upstream 5494 true SL2.50ch05: 62952846-62958339 Solanum lycopersicum
Solyc05g052760.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 62952846-62953345 Solanum lycopersicum
Solyc05g052760.2 0.5kb downstream 0.5kb downstream 5494 true SL2.50ch05: 62953346-62958839 Solanum lycopersicum
Solyc05g052760.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 62958340-62958839 Solanum lycopersicum
Solyc05g052760.2 1.0kb upstream 1.0kb upstream 5994 true SL2.50ch05: 62952346-62958339 Solanum lycopersicum
Solyc05g052760.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 62952346-62953345 Solanum lycopersicum
Solyc05g052760.2 1.0kb downstream 1.0kb downstream 5994 true SL2.50ch05: 62953346-62959339 Solanum lycopersicum
Solyc05g052760.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 62958340-62959339 Solanum lycopersicum
Solyc05g052760.2 2.0kb upstream 2.0kb upstream 6994 true SL2.50ch05: 62951346-62958339 Solanum lycopersicum
Solyc05g052760.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 62951346-62953345 Solanum lycopersicum
Solyc05g052760.2 2.0kb downstream 2.0kb downstream 6994 true SL2.50ch05: 62953346-62960339 Solanum lycopersicum
Solyc05g052760.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 62958340-62960339 Solanum lycopersicum
Solyc05g052760.2 5.0kb upstream 5.0kb upstream 9994 true SL2.50ch05: 62948346-62958339 Solanum lycopersicum
Solyc05g052760.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 62948346-62953345 Solanum lycopersicum
Solyc05g052760.2 5.0kb downstream 5.0kb downstream 9994 true SL2.50ch05: 62953346-62963339 Solanum lycopersicum
Solyc05g052760.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 62958340-62963339 Solanum lycopersicum
Solyc05g052760.2 10.0kb upstream 10.0kb upstream 14994 true SL2.50ch05: 62943346-62958339 Solanum lycopersicum
Solyc05g052760.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 62943346-62953345 Solanum lycopersicum
Solyc05g052760.2 10.0kb downstream 10.0kb downstream 14994 true SL2.50ch05: 62953346-62968339 Solanum lycopersicum
Solyc05g052760.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 62958340-62968339 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474620 5263 Asterids View MSA
123747750 5271 Pentapetalae View MSA
122786994 5272 Eudicot View MSA
122046719 5273 Angiosperm View MSA
121351735 5274 Embryophyte View MSA
123428200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain