Gene : Solyc05g052180.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K15025 - probable RNA-binding protein EIF1AD (EIF1AD) Description:  Translation initiation factor 1a (AHRD V1 *--- Q1HQA3_BOMMO); contains Interpro domain(s) IPR001253 Translation initiation factor 1A (eIF-1A)
Genomic Order:  1979 Name:  ? Solyc05g052180.2
Secondary Identifier:  ? PAC:36145707
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g052180.2 0.5kb upstream 0.5kb upstream 3177 true SL2.50ch05: 62461712-62464888 Solanum lycopersicum
Solyc05g052180.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 62464389-62464888 Solanum lycopersicum
Solyc05g052180.2 0.5kb downstream 0.5kb downstream 3177 true SL2.50ch05: 62461212-62464388 Solanum lycopersicum
Solyc05g052180.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 62461212-62461711 Solanum lycopersicum
Solyc05g052180.2 1.0kb upstream 1.0kb upstream 3677 true SL2.50ch05: 62461712-62465388 Solanum lycopersicum
Solyc05g052180.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 62464389-62465388 Solanum lycopersicum
Solyc05g052180.2 1.0kb downstream 1.0kb downstream 3677 true SL2.50ch05: 62460712-62464388 Solanum lycopersicum
Solyc05g052180.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 62460712-62461711 Solanum lycopersicum
Solyc05g052180.2 2.0kb upstream 2.0kb upstream 4677 true SL2.50ch05: 62461712-62466388 Solanum lycopersicum
Solyc05g052180.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 62464389-62466388 Solanum lycopersicum
Solyc05g052180.2 2.0kb downstream 2.0kb downstream 4677 true SL2.50ch05: 62459712-62464388 Solanum lycopersicum
Solyc05g052180.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 62459712-62461711 Solanum lycopersicum
Solyc05g052180.2 5.0kb upstream 5.0kb upstream 7677 true SL2.50ch05: 62461712-62469388 Solanum lycopersicum
Solyc05g052180.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 62464389-62469388 Solanum lycopersicum
Solyc05g052180.2 5.0kb downstream 5.0kb downstream 7677 true SL2.50ch05: 62456712-62464388 Solanum lycopersicum
Solyc05g052180.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 62456712-62461711 Solanum lycopersicum
Solyc05g052180.2 10.0kb upstream 10.0kb upstream 12677 true SL2.50ch05: 62461712-62474388 Solanum lycopersicum
Solyc05g052180.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 62464389-62474388 Solanum lycopersicum
Solyc05g052180.2 10.0kb downstream 10.0kb downstream 12677 true SL2.50ch05: 62451712-62464388 Solanum lycopersicum
Solyc05g052180.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 62451712-62461711 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476586 5263 Asterids View MSA
123739178 5271 Pentapetalae View MSA
122790312 5272 Eudicot View MSA
122047089 5273 Angiosperm View MSA
121344267 5274 Embryophyte View MSA
123425448 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain