Gene : Solyc05g053610.2 S. lycopersicum ITAG2.4
Defline:  (1 of 7) PTHR19241//PTHR19241:SF221 - ATP-BINDING CASSETTE TRANSPORTER // SUBFAMILY NOT NAMED Description:  ATP-binding cassette transporter (AHRD V1 ***- D8RL93_SELML); contains Interpro domain(s) IPR013525 ABC-2 type transporter
Genomic Order:  2121 Name:  ? Solyc05g053610.2
Secondary Identifier:  ? PAC:36145342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g053610.2 0.5kb upstream 0.5kb upstream 7808 true SL2.50ch05: 63675847-63683654 Solanum lycopersicum
Solyc05g053610.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 63683155-63683654 Solanum lycopersicum
Solyc05g053610.2 0.5kb downstream 0.5kb downstream 7808 true SL2.50ch05: 63675347-63683154 Solanum lycopersicum
Solyc05g053610.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 63675347-63675846 Solanum lycopersicum
Solyc05g053610.2 1.0kb upstream 1.0kb upstream 8308 true SL2.50ch05: 63675847-63684154 Solanum lycopersicum
Solyc05g053610.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 63683155-63684154 Solanum lycopersicum
Solyc05g053610.2 1.0kb downstream 1.0kb downstream 8308 true SL2.50ch05: 63674847-63683154 Solanum lycopersicum
Solyc05g053610.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 63674847-63675846 Solanum lycopersicum
Solyc05g053610.2 2.0kb upstream 2.0kb upstream 9308 true SL2.50ch05: 63675847-63685154 Solanum lycopersicum
Solyc05g053610.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 63683155-63685154 Solanum lycopersicum
Solyc05g053610.2 2.0kb downstream 2.0kb downstream 9308 true SL2.50ch05: 63673847-63683154 Solanum lycopersicum
Solyc05g053610.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 63673847-63675846 Solanum lycopersicum
Solyc05g053610.2 5.0kb upstream 5.0kb upstream 12308 true SL2.50ch05: 63675847-63688154 Solanum lycopersicum
Solyc05g053610.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 63683155-63688154 Solanum lycopersicum
Solyc05g053610.2 5.0kb downstream 5.0kb downstream 12308 true SL2.50ch05: 63670847-63683154 Solanum lycopersicum
Solyc05g053610.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 63670847-63675846 Solanum lycopersicum
Solyc05g053610.2 10.0kb upstream 10.0kb upstream 17308 true SL2.50ch05: 63675847-63693154 Solanum lycopersicum
Solyc05g053610.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 63683155-63693154 Solanum lycopersicum
Solyc05g053610.2 10.0kb downstream 10.0kb downstream 17308 true SL2.50ch05: 63665847-63683154 Solanum lycopersicum
Solyc05g053610.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 63665847-63675846 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041102 5273 Angiosperm View MSA
121388200 5263 Asterids View MSA
123750377 5271 Pentapetalae View MSA
122791743 5272 Eudicot View MSA
123428903 5275 Viridiplantae View MSA
121351020 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain