Gene : Solyc01g088020.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K14005 - protein transport protein SEC31 (SEC31) Description:  Protein transport protein sec31 (AHRD V1 **-- C8V1I6_EMENI); contains Interpro domain(s) IPR017986 WD40 repeat, region
Genomic Order:  2256 Name:  ? Solyc01g088020.2
Secondary Identifier:  ? PAC:36137898
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g088020.2 0.5kb upstream 0.5kb upstream 14087 true SL2.50ch01: 82868801-82882887 Solanum lycopersicum
Solyc01g088020.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82868801-82869300 Solanum lycopersicum
Solyc01g088020.2 0.5kb downstream 0.5kb downstream 14087 true SL2.50ch01: 82869301-82883387 Solanum lycopersicum
Solyc01g088020.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82882888-82883387 Solanum lycopersicum
Solyc01g088020.2 1.0kb upstream 1.0kb upstream 14587 true SL2.50ch01: 82868301-82882887 Solanum lycopersicum
Solyc01g088020.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82868301-82869300 Solanum lycopersicum
Solyc01g088020.2 1.0kb downstream 1.0kb downstream 14587 true SL2.50ch01: 82869301-82883887 Solanum lycopersicum
Solyc01g088020.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82882888-82883887 Solanum lycopersicum
Solyc01g088020.2 2.0kb upstream 2.0kb upstream 15587 true SL2.50ch01: 82867301-82882887 Solanum lycopersicum
Solyc01g088020.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82867301-82869300 Solanum lycopersicum
Solyc01g088020.2 2.0kb downstream 2.0kb downstream 15587 true SL2.50ch01: 82869301-82884887 Solanum lycopersicum
Solyc01g088020.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82882888-82884887 Solanum lycopersicum
Solyc01g088020.2 5.0kb upstream 5.0kb upstream 18587 true SL2.50ch01: 82864301-82882887 Solanum lycopersicum
Solyc01g088020.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82864301-82869300 Solanum lycopersicum
Solyc01g088020.2 5.0kb downstream 5.0kb downstream 18587 true SL2.50ch01: 82869301-82887887 Solanum lycopersicum
Solyc01g088020.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82882888-82887887 Solanum lycopersicum
Solyc01g088020.2 10.0kb upstream 10.0kb upstream 23587 true SL2.50ch01: 82859301-82882887 Solanum lycopersicum
Solyc01g088020.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82859301-82869300 Solanum lycopersicum
Solyc01g088020.2 10.0kb downstream 10.0kb downstream 23587 true SL2.50ch01: 82869301-82892887 Solanum lycopersicum
Solyc01g088020.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82882888-82892887 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029056 5273 Angiosperm View MSA
121470857 5263 Asterids View MSA
123747361 5271 Pentapetalae View MSA
122791876 5272 Eudicot View MSA
121344337 5274 Embryophyte View MSA
123426068 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain