Gene : Solyc05g032750.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PF01476//PF10358 - LysM domain (LysM) // N-terminal C2 in EEIG1 and EHBP1 proteins (NT-C2) Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR002482 Peptidoglycan-binding Lysin subgroup
Genomic Order:  1435 Name:  ? Solyc05g032750.2
Secondary Identifier:  ? PAC:36145682
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g032750.2 0.5kb upstream 0.5kb upstream 4605 true SL2.50ch05: 45086491-45091095 Solanum lycopersicum
Solyc05g032750.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 45090596-45091095 Solanum lycopersicum
Solyc05g032750.2 0.5kb downstream 0.5kb downstream 4605 true SL2.50ch05: 45085991-45090595 Solanum lycopersicum
Solyc05g032750.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 45085991-45086490 Solanum lycopersicum
Solyc05g032750.2 1.0kb upstream 1.0kb upstream 5105 true SL2.50ch05: 45086491-45091595 Solanum lycopersicum
Solyc05g032750.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 45090596-45091595 Solanum lycopersicum
Solyc05g032750.2 1.0kb downstream 1.0kb downstream 5105 true SL2.50ch05: 45085491-45090595 Solanum lycopersicum
Solyc05g032750.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 45085491-45086490 Solanum lycopersicum
Solyc05g032750.2 2.0kb upstream 2.0kb upstream 6105 true SL2.50ch05: 45086491-45092595 Solanum lycopersicum
Solyc05g032750.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 45090596-45092595 Solanum lycopersicum
Solyc05g032750.2 2.0kb downstream 2.0kb downstream 6105 true SL2.50ch05: 45084491-45090595 Solanum lycopersicum
Solyc05g032750.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 45084491-45086490 Solanum lycopersicum
Solyc05g032750.2 5.0kb upstream 5.0kb upstream 9105 true SL2.50ch05: 45086491-45095595 Solanum lycopersicum
Solyc05g032750.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 45090596-45095595 Solanum lycopersicum
Solyc05g032750.2 5.0kb downstream 5.0kb downstream 9105 true SL2.50ch05: 45081491-45090595 Solanum lycopersicum
Solyc05g032750.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 45081491-45086490 Solanum lycopersicum
Solyc05g032750.2 10.0kb upstream 10.0kb upstream 14105 true SL2.50ch05: 45086491-45100595 Solanum lycopersicum
Solyc05g032750.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 45090596-45100595 Solanum lycopersicum
Solyc05g032750.2 10.0kb downstream 10.0kb downstream 14105 true SL2.50ch05: 45076491-45090595 Solanum lycopersicum
Solyc05g032750.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 45076491-45086490 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041160 5273 Angiosperm View MSA
121467486 5263 Asterids View MSA
123747985 5271 Pentapetalae View MSA
122787610 5272 Eudicot View MSA
121351734 5274 Embryophyte View MSA
123382297 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain