Gene : Solyc01g088160.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR13878:SF53 - CYTOKININ DEHYDROGENASE 6 Description:  Cytokinin oxidase/dehydrogenase (AHRD V1 **** C3VPM6_SOLTU); contains Interpro domain(s) IPR015345 Cytokinin dehydrogenase 1, FAD and cytokinin binding
Genomic Order:  2270 Name:  ? Solyc01g088160.2
Secondary Identifier:  ? PAC:36137706
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g088160.2 0.5kb upstream 0.5kb upstream 2788 true SL2.50ch01: 83010891-83013678 Solanum lycopersicum
Solyc01g088160.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 83013179-83013678 Solanum lycopersicum
Solyc01g088160.2 0.5kb downstream 0.5kb downstream 2788 true SL2.50ch01: 83010391-83013178 Solanum lycopersicum
Solyc01g088160.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 83010391-83010890 Solanum lycopersicum
Solyc01g088160.2 1.0kb upstream 1.0kb upstream 3288 true SL2.50ch01: 83010891-83014178 Solanum lycopersicum
Solyc01g088160.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 83013179-83014178 Solanum lycopersicum
Solyc01g088160.2 1.0kb downstream 1.0kb downstream 3288 true SL2.50ch01: 83009891-83013178 Solanum lycopersicum
Solyc01g088160.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 83009891-83010890 Solanum lycopersicum
Solyc01g088160.2 2.0kb upstream 2.0kb upstream 4288 true SL2.50ch01: 83010891-83015178 Solanum lycopersicum
Solyc01g088160.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 83013179-83015178 Solanum lycopersicum
Solyc01g088160.2 2.0kb downstream 2.0kb downstream 4288 true SL2.50ch01: 83008891-83013178 Solanum lycopersicum
Solyc01g088160.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 83008891-83010890 Solanum lycopersicum
Solyc01g088160.2 5.0kb upstream 5.0kb upstream 7288 true SL2.50ch01: 83010891-83018178 Solanum lycopersicum
Solyc01g088160.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 83013179-83018178 Solanum lycopersicum
Solyc01g088160.2 5.0kb downstream 5.0kb downstream 7288 true SL2.50ch01: 83005891-83013178 Solanum lycopersicum
Solyc01g088160.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 83005891-83010890 Solanum lycopersicum
Solyc01g088160.2 10.0kb upstream 10.0kb upstream 12288 true SL2.50ch01: 83010891-83023178 Solanum lycopersicum
Solyc01g088160.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 83013179-83023178 Solanum lycopersicum
Solyc01g088160.2 10.0kb downstream 10.0kb downstream 12288 true SL2.50ch01: 83000891-83013178 Solanum lycopersicum
Solyc01g088160.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 83000891-83010890 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480050 5263 Asterids View MSA
123739719 5271 Pentapetalae View MSA
122789559 5272 Eudicot View MSA
122043660 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain