Gene : Solyc01g088130.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR13989 - REPLICATION PROTEIN A-RELATED Description:  CST complex subunit STN1 (AHRD V1 ***- STN1_ARATH); contains Interpro domain(s) IPR012340 Nucleic acid-binding, OB-fold
Genomic Order:  2267 Name:  ? Solyc01g088130.2
Secondary Identifier:  ? PAC:36140790
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc01g088130.2 0.5kb upstream 0.5kb upstream 1247 true SL2.50ch01: 82989219-82990465 Solanum lycopersicum
Solyc01g088130.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch01: 82989966-82990465 Solanum lycopersicum
Solyc01g088130.2 0.5kb downstream 0.5kb downstream 1247 true SL2.50ch01: 82988719-82989965 Solanum lycopersicum
Solyc01g088130.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch01: 82988719-82989218 Solanum lycopersicum
Solyc01g088130.2 1.0kb upstream 1.0kb upstream 1747 true SL2.50ch01: 82989219-82990965 Solanum lycopersicum
Solyc01g088130.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch01: 82989966-82990965 Solanum lycopersicum
Solyc01g088130.2 1.0kb downstream 1.0kb downstream 1747 true SL2.50ch01: 82988219-82989965 Solanum lycopersicum
Solyc01g088130.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch01: 82988219-82989218 Solanum lycopersicum
Solyc01g088130.2 2.0kb upstream 2.0kb upstream 2747 true SL2.50ch01: 82989219-82991965 Solanum lycopersicum
Solyc01g088130.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch01: 82989966-82991965 Solanum lycopersicum
Solyc01g088130.2 2.0kb downstream 2.0kb downstream 2747 true SL2.50ch01: 82987219-82989965 Solanum lycopersicum
Solyc01g088130.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch01: 82987219-82989218 Solanum lycopersicum
Solyc01g088130.2 5.0kb upstream 5.0kb upstream 5747 true SL2.50ch01: 82989219-82994965 Solanum lycopersicum
Solyc01g088130.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch01: 82989966-82994965 Solanum lycopersicum
Solyc01g088130.2 5.0kb downstream 5.0kb downstream 5747 true SL2.50ch01: 82984219-82989965 Solanum lycopersicum
Solyc01g088130.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch01: 82984219-82989218 Solanum lycopersicum
Solyc01g088130.2 10.0kb upstream 10.0kb upstream 10747 true SL2.50ch01: 82989219-82999965 Solanum lycopersicum
Solyc01g088130.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch01: 82989966-82999965 Solanum lycopersicum
Solyc01g088130.2 10.0kb downstream 10.0kb downstream 10747 true SL2.50ch01: 82979219-82989965 Solanum lycopersicum
Solyc01g088130.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch01: 82979219-82989218 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466366 5263 Asterids View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain