Gene : Solyc05g050120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 5) K00029 - malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) (E1.1.1.40, maeB) Description:  Malic enzyme (AHRD V1 ***- O04936_SOLLC); contains Interpro domain(s) IPR012302 Malic enzyme, NAD-binding
Genomic Order:  1774 Name:  ? Solyc05g050120.2
Secondary Identifier:  ? PAC:36145271
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum GLUCONEO-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-241 Solanum lycopersicum pathologic  
Slycopersicum PWY-7117 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc05g050120.2 0.5kb upstream 0.5kb upstream 4813 true SL2.50ch05: 60104088-60108900 Solanum lycopersicum
Solyc05g050120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch05: 60104088-60104587 Solanum lycopersicum
Solyc05g050120.2 0.5kb downstream 0.5kb downstream 4813 true SL2.50ch05: 60104588-60109400 Solanum lycopersicum
Solyc05g050120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch05: 60108901-60109400 Solanum lycopersicum
Solyc05g050120.2 1.0kb upstream 1.0kb upstream 5313 true SL2.50ch05: 60103588-60108900 Solanum lycopersicum
Solyc05g050120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch05: 60103588-60104587 Solanum lycopersicum
Solyc05g050120.2 1.0kb downstream 1.0kb downstream 5313 true SL2.50ch05: 60104588-60109900 Solanum lycopersicum
Solyc05g050120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch05: 60108901-60109900 Solanum lycopersicum
Solyc05g050120.2 2.0kb upstream 2.0kb upstream 6313 true SL2.50ch05: 60102588-60108900 Solanum lycopersicum
Solyc05g050120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch05: 60102588-60104587 Solanum lycopersicum
Solyc05g050120.2 2.0kb downstream 2.0kb downstream 6313 true SL2.50ch05: 60104588-60110900 Solanum lycopersicum
Solyc05g050120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch05: 60108901-60110900 Solanum lycopersicum
Solyc05g050120.2 5.0kb upstream 5.0kb upstream 9313 true SL2.50ch05: 60099588-60108900 Solanum lycopersicum
Solyc05g050120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch05: 60099588-60104587 Solanum lycopersicum
Solyc05g050120.2 5.0kb downstream 5.0kb downstream 9313 true SL2.50ch05: 60104588-60113900 Solanum lycopersicum
Solyc05g050120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch05: 60108901-60113900 Solanum lycopersicum
Solyc05g050120.2 10.0kb upstream 10.0kb upstream 14313 true SL2.50ch05: 60094588-60108900 Solanum lycopersicum
Solyc05g050120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch05: 60094588-60104587 Solanum lycopersicum
Solyc05g050120.2 10.0kb downstream 10.0kb downstream 14313 true SL2.50ch05: 60104588-60118900 Solanum lycopersicum
Solyc05g050120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch05: 60108901-60118900 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470365 5263 Asterids View MSA
123751350 5271 Pentapetalae View MSA
122794130 5272 Eudicot View MSA
122042224 5273 Angiosperm View MSA
121345569 5274 Embryophyte View MSA
123428715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain