Gene : Solyc02g079740.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23315:SF112 - U-BOX DOMAIN-CONTAINING PROTEIN 8 Description:  U-box domain-containing protein (Fragment) (AHRD V1 ***- B1P3P0_ARAHA); contains Interpro domain(s) IPR011989 Armadillo-like helical
Genomic Order:  1855 Name:  ? Solyc02g079740.1
Secondary Identifier:  ? PAC:36158902
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7511 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g079740.1 0.5kb upstream 0.5kb upstream 1616 true SL2.50ch02: 44185574-44187189 Solanum lycopersicum
Solyc02g079740.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 44185574-44186073 Solanum lycopersicum
Solyc02g079740.1 0.5kb downstream 0.5kb downstream 1616 true SL2.50ch02: 44186074-44187689 Solanum lycopersicum
Solyc02g079740.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 44187190-44187689 Solanum lycopersicum
Solyc02g079740.1 1.0kb upstream 1.0kb upstream 2116 true SL2.50ch02: 44185074-44187189 Solanum lycopersicum
Solyc02g079740.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 44185074-44186073 Solanum lycopersicum
Solyc02g079740.1 1.0kb downstream 1.0kb downstream 2116 true SL2.50ch02: 44186074-44188189 Solanum lycopersicum
Solyc02g079740.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 44187190-44188189 Solanum lycopersicum
Solyc02g079740.1 2.0kb upstream 2.0kb upstream 3116 true SL2.50ch02: 44184074-44187189 Solanum lycopersicum
Solyc02g079740.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 44184074-44186073 Solanum lycopersicum
Solyc02g079740.1 2.0kb downstream 2.0kb downstream 3116 true SL2.50ch02: 44186074-44189189 Solanum lycopersicum
Solyc02g079740.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 44187190-44189189 Solanum lycopersicum
Solyc02g079740.1 5.0kb upstream 5.0kb upstream 6116 true SL2.50ch02: 44181074-44187189 Solanum lycopersicum
Solyc02g079740.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 44181074-44186073 Solanum lycopersicum
Solyc02g079740.1 5.0kb downstream 5.0kb downstream 6116 true SL2.50ch02: 44186074-44192189 Solanum lycopersicum
Solyc02g079740.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 44187190-44192189 Solanum lycopersicum
Solyc02g079740.1 10.0kb upstream 10.0kb upstream 11116 true SL2.50ch02: 44176074-44187189 Solanum lycopersicum
Solyc02g079740.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 44176074-44186073 Solanum lycopersicum
Solyc02g079740.1 10.0kb downstream 10.0kb downstream 11116 true SL2.50ch02: 44186074-44197189 Solanum lycopersicum
Solyc02g079740.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 44187190-44197189 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468774 5263 Asterids View MSA
123739822 5271 Pentapetalae View MSA
122791659 5272 Eudicot View MSA
122041968 5273 Angiosperm View MSA
121350406 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain