Gene : Solyc02g079170.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF00036//PF00070 - EF hand (EF-hand_1) // Pyridine nucleotide-disulphide oxidoreductase (Pyr_redox) Description:  NADH dehydrogenase like protein (AHRD V1 **** O65414_ARATH); contains Interpro domain(s) IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Genomic Order:  1799 Name:  ? Solyc02g079170.2
Secondary Identifier:  ? PAC:36159277
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7279 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g079170.2 0.5kb upstream 0.5kb upstream 6110 true SL2.50ch02: 43781710-43787819 Solanum lycopersicum
Solyc02g079170.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 43781710-43782209 Solanum lycopersicum
Solyc02g079170.2 0.5kb downstream 0.5kb downstream 6110 true SL2.50ch02: 43782210-43788319 Solanum lycopersicum
Solyc02g079170.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 43787820-43788319 Solanum lycopersicum
Solyc02g079170.2 1.0kb upstream 1.0kb upstream 6610 true SL2.50ch02: 43781210-43787819 Solanum lycopersicum
Solyc02g079170.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 43781210-43782209 Solanum lycopersicum
Solyc02g079170.2 1.0kb downstream 1.0kb downstream 6610 true SL2.50ch02: 43782210-43788819 Solanum lycopersicum
Solyc02g079170.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 43787820-43788819 Solanum lycopersicum
Solyc02g079170.2 2.0kb upstream 2.0kb upstream 7610 true SL2.50ch02: 43780210-43787819 Solanum lycopersicum
Solyc02g079170.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 43780210-43782209 Solanum lycopersicum
Solyc02g079170.2 2.0kb downstream 2.0kb downstream 7610 true SL2.50ch02: 43782210-43789819 Solanum lycopersicum
Solyc02g079170.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 43787820-43789819 Solanum lycopersicum
Solyc02g079170.2 5.0kb upstream 5.0kb upstream 10610 true SL2.50ch02: 43777210-43787819 Solanum lycopersicum
Solyc02g079170.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 43777210-43782209 Solanum lycopersicum
Solyc02g079170.2 5.0kb downstream 5.0kb downstream 10610 true SL2.50ch02: 43782210-43792819 Solanum lycopersicum
Solyc02g079170.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 43787820-43792819 Solanum lycopersicum
Solyc02g079170.2 10.0kb upstream 10.0kb upstream 15610 true SL2.50ch02: 43772210-43787819 Solanum lycopersicum
Solyc02g079170.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 43772210-43782209 Solanum lycopersicum
Solyc02g079170.2 10.0kb downstream 10.0kb downstream 15610 true SL2.50ch02: 43782210-43797819 Solanum lycopersicum
Solyc02g079170.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 43787820-43797819 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469007 5263 Asterids View MSA
123740807 5271 Pentapetalae View MSA
122787456 5272 Eudicot View MSA
122046891 5273 Angiosperm View MSA
121348097 5274 Embryophyte View MSA
123427504 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain