Gene : Solyc02g079030.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K04718 - sphingosine kinase (SPHK) Description:  Sphingosine kinase 1 (AHRD V1 **** Q28EJ9_XENTR); contains Interpro domain(s) IPR001206 Diacylglycerol kinase, catalytic region
Genomic Order:  1785 Name:  ? Solyc02g079030.2
Secondary Identifier:  ? PAC:36157817
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5129 Solanum lycopersicum pathologic  
Slycopersicum PWY-6483 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g079030.2 0.5kb upstream 0.5kb upstream 7520 true SL2.50ch02: 43653250-43660769 Solanum lycopersicum
Solyc02g079030.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 43660270-43660769 Solanum lycopersicum
Solyc02g079030.2 0.5kb downstream 0.5kb downstream 7520 true SL2.50ch02: 43652750-43660269 Solanum lycopersicum
Solyc02g079030.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 43652750-43653249 Solanum lycopersicum
Solyc02g079030.2 1.0kb upstream 1.0kb upstream 8020 true SL2.50ch02: 43653250-43661269 Solanum lycopersicum
Solyc02g079030.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 43660270-43661269 Solanum lycopersicum
Solyc02g079030.2 1.0kb downstream 1.0kb downstream 8020 true SL2.50ch02: 43652250-43660269 Solanum lycopersicum
Solyc02g079030.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 43652250-43653249 Solanum lycopersicum
Solyc02g079030.2 2.0kb upstream 2.0kb upstream 9020 true SL2.50ch02: 43653250-43662269 Solanum lycopersicum
Solyc02g079030.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 43660270-43662269 Solanum lycopersicum
Solyc02g079030.2 2.0kb downstream 2.0kb downstream 9020 true SL2.50ch02: 43651250-43660269 Solanum lycopersicum
Solyc02g079030.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 43651250-43653249 Solanum lycopersicum
Solyc02g079030.2 5.0kb upstream 5.0kb upstream 12020 true SL2.50ch02: 43653250-43665269 Solanum lycopersicum
Solyc02g079030.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 43660270-43665269 Solanum lycopersicum
Solyc02g079030.2 5.0kb downstream 5.0kb downstream 12020 true SL2.50ch02: 43648250-43660269 Solanum lycopersicum
Solyc02g079030.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 43648250-43653249 Solanum lycopersicum
Solyc02g079030.2 10.0kb upstream 10.0kb upstream 17020 true SL2.50ch02: 43653250-43670269 Solanum lycopersicum
Solyc02g079030.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 43660270-43670269 Solanum lycopersicum
Solyc02g079030.2 10.0kb downstream 10.0kb downstream 17020 true SL2.50ch02: 43643250-43660269 Solanum lycopersicum
Solyc02g079030.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 43643250-43653249 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481074 5263 Asterids View MSA
123737091 5271 Pentapetalae View MSA
122793625 5272 Eudicot View MSA
122045440 5273 Angiosperm View MSA
121350923 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain