Gene : Solyc02g081960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K12825 - splicing factor 3A subunit 1 (SF3A1, SAP114) Description:  Splicing factor (AHRD V1 *-*- Q5CJR5_CRYHO); contains Interpro domain(s) IPR000061 SWAP/Surp
Genomic Order:  2077 Name:  ? Solyc02g081960.2
Secondary Identifier:  ? PAC:36158830
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g081960.2 0.5kb upstream 0.5kb upstream 3799 true SL2.50ch02: 45713582-45717380 Solanum lycopersicum
Solyc02g081960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 45713582-45714081 Solanum lycopersicum
Solyc02g081960.2 0.5kb downstream 0.5kb downstream 3799 true SL2.50ch02: 45714082-45717880 Solanum lycopersicum
Solyc02g081960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 45717381-45717880 Solanum lycopersicum
Solyc02g081960.2 1.0kb upstream 1.0kb upstream 4299 true SL2.50ch02: 45713082-45717380 Solanum lycopersicum
Solyc02g081960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 45713082-45714081 Solanum lycopersicum
Solyc02g081960.2 1.0kb downstream 1.0kb downstream 4299 true SL2.50ch02: 45714082-45718380 Solanum lycopersicum
Solyc02g081960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 45717381-45718380 Solanum lycopersicum
Solyc02g081960.2 2.0kb upstream 2.0kb upstream 5299 true SL2.50ch02: 45712082-45717380 Solanum lycopersicum
Solyc02g081960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 45712082-45714081 Solanum lycopersicum
Solyc02g081960.2 2.0kb downstream 2.0kb downstream 5299 true SL2.50ch02: 45714082-45719380 Solanum lycopersicum
Solyc02g081960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 45717381-45719380 Solanum lycopersicum
Solyc02g081960.2 5.0kb upstream 5.0kb upstream 8299 true SL2.50ch02: 45709082-45717380 Solanum lycopersicum
Solyc02g081960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 45709082-45714081 Solanum lycopersicum
Solyc02g081960.2 5.0kb downstream 5.0kb downstream 8299 true SL2.50ch02: 45714082-45722380 Solanum lycopersicum
Solyc02g081960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 45717381-45722380 Solanum lycopersicum
Solyc02g081960.2 10.0kb upstream 10.0kb upstream 13299 true SL2.50ch02: 45704082-45717380 Solanum lycopersicum
Solyc02g081960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 45704082-45714081 Solanum lycopersicum
Solyc02g081960.2 10.0kb downstream 10.0kb downstream 13299 true SL2.50ch02: 45714082-45727380 Solanum lycopersicum
Solyc02g081960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 45717381-45727380 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041332 5273 Angiosperm View MSA
121386213 5263 Asterids View MSA
123748218 5271 Pentapetalae View MSA
122792189 5272 Eudicot View MSA
121344762 5274 Embryophyte View MSA
123425409 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain