Gene : Solyc02g080480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR11206:SF140 - MATE EFFLUX FAMILY PROTEIN Description:  Multidrug resistance protein mdtK (AHRD V1 **-- MDTK_EDWI9); contains Interpro domain(s) IPR002528 Multi antimicrobial extrusion protein MatE
Genomic Order:  1929 Name:  ? Solyc02g080480.2
Secondary Identifier:  ? PAC:36156975
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g080480.2 0.5kb upstream 0.5kb upstream 3537 true SL2.50ch02: 44685776-44689312 Solanum lycopersicum
Solyc02g080480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 44688813-44689312 Solanum lycopersicum
Solyc02g080480.2 0.5kb downstream 0.5kb downstream 3537 true SL2.50ch02: 44685276-44688812 Solanum lycopersicum
Solyc02g080480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 44685276-44685775 Solanum lycopersicum
Solyc02g080480.2 1.0kb upstream 1.0kb upstream 4037 true SL2.50ch02: 44685776-44689812 Solanum lycopersicum
Solyc02g080480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 44688813-44689812 Solanum lycopersicum
Solyc02g080480.2 1.0kb downstream 1.0kb downstream 4037 true SL2.50ch02: 44684776-44688812 Solanum lycopersicum
Solyc02g080480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 44684776-44685775 Solanum lycopersicum
Solyc02g080480.2 2.0kb upstream 2.0kb upstream 5037 true SL2.50ch02: 44685776-44690812 Solanum lycopersicum
Solyc02g080480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 44688813-44690812 Solanum lycopersicum
Solyc02g080480.2 2.0kb downstream 2.0kb downstream 5037 true SL2.50ch02: 44683776-44688812 Solanum lycopersicum
Solyc02g080480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 44683776-44685775 Solanum lycopersicum
Solyc02g080480.2 5.0kb upstream 5.0kb upstream 8037 true SL2.50ch02: 44685776-44693812 Solanum lycopersicum
Solyc02g080480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 44688813-44693812 Solanum lycopersicum
Solyc02g080480.2 5.0kb downstream 5.0kb downstream 8037 true SL2.50ch02: 44680776-44688812 Solanum lycopersicum
Solyc02g080480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 44680776-44685775 Solanum lycopersicum
Solyc02g080480.2 10.0kb upstream 10.0kb upstream 13037 true SL2.50ch02: 44685776-44698812 Solanum lycopersicum
Solyc02g080480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 44688813-44698812 Solanum lycopersicum
Solyc02g080480.2 10.0kb downstream 10.0kb downstream 13037 true SL2.50ch02: 44675776-44688812 Solanum lycopersicum
Solyc02g080480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 44675776-44685775 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476961 5263 Asterids View MSA
123747983 5271 Pentapetalae View MSA
122786922 5272 Eudicot View MSA
122050249 5273 Angiosperm View MSA
121311823 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain