Gene : Solyc02g080370.2 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PF06454 - Protein of unknown function (DUF1084) (DUF1084) Description:  Tobamovirus multiplication protein (Fragment) (AHRD V1 ***- B0ZZ80_ARAHY); contains Interpro domain(s) IPR009457 Protein of unknown function DUF1084
Genomic Order:  1918 Name:  ? Solyc02g080370.2
Secondary Identifier:  ? PAC:36158667
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g080370.2 0.5kb upstream 0.5kb upstream 7585 true SL2.50ch02: 44606937-44614521 Solanum lycopersicum
Solyc02g080370.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 44606937-44607436 Solanum lycopersicum
Solyc02g080370.2 0.5kb downstream 0.5kb downstream 7585 true SL2.50ch02: 44607437-44615021 Solanum lycopersicum
Solyc02g080370.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 44614522-44615021 Solanum lycopersicum
Solyc02g080370.2 1.0kb upstream 1.0kb upstream 8085 true SL2.50ch02: 44606437-44614521 Solanum lycopersicum
Solyc02g080370.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 44606437-44607436 Solanum lycopersicum
Solyc02g080370.2 1.0kb downstream 1.0kb downstream 8085 true SL2.50ch02: 44607437-44615521 Solanum lycopersicum
Solyc02g080370.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 44614522-44615521 Solanum lycopersicum
Solyc02g080370.2 2.0kb upstream 2.0kb upstream 9085 true SL2.50ch02: 44605437-44614521 Solanum lycopersicum
Solyc02g080370.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 44605437-44607436 Solanum lycopersicum
Solyc02g080370.2 2.0kb downstream 2.0kb downstream 9085 true SL2.50ch02: 44607437-44616521 Solanum lycopersicum
Solyc02g080370.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 44614522-44616521 Solanum lycopersicum
Solyc02g080370.2 5.0kb upstream 5.0kb upstream 12085 true SL2.50ch02: 44602437-44614521 Solanum lycopersicum
Solyc02g080370.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 44602437-44607436 Solanum lycopersicum
Solyc02g080370.2 5.0kb downstream 5.0kb downstream 12085 true SL2.50ch02: 44607437-44619521 Solanum lycopersicum
Solyc02g080370.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 44614522-44619521 Solanum lycopersicum
Solyc02g080370.2 10.0kb upstream 10.0kb upstream 17085 true SL2.50ch02: 44597437-44614521 Solanum lycopersicum
Solyc02g080370.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 44597437-44607436 Solanum lycopersicum
Solyc02g080370.2 10.0kb downstream 10.0kb downstream 17085 true SL2.50ch02: 44607437-44624521 Solanum lycopersicum
Solyc02g080370.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 44614522-44624521 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469328 5263 Asterids View MSA
123753465 5271 Pentapetalae View MSA
122796045 5272 Eudicot View MSA
122049721 5273 Angiosperm View MSA
121345693 5274 Embryophyte View MSA
123426001 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain