Gene : Solyc02g080990.1 S. lycopersicum ITAG2.4
Defline:  (1 of 3) K01869 - leucyl-tRNA synthetase (LARS, leuS) Description:  Leucyl-tRNA synthetase (AHRD V1 **** C6IZI6_9BACL); contains Interpro domain(s) IPR002302 Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial
Genomic Order:  1980 Name:  ? Solyc02g080990.1
Secondary Identifier:  ? PAC:36158492
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g080990.1 0.5kb upstream 0.5kb upstream 7897 true SL2.50ch02: 45050730-45058626 Solanum lycopersicum
Solyc02g080990.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 45058127-45058626 Solanum lycopersicum
Solyc02g080990.1 0.5kb downstream 0.5kb downstream 7897 true SL2.50ch02: 45050230-45058126 Solanum lycopersicum
Solyc02g080990.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 45050230-45050729 Solanum lycopersicum
Solyc02g080990.1 1.0kb upstream 1.0kb upstream 8397 true SL2.50ch02: 45050730-45059126 Solanum lycopersicum
Solyc02g080990.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 45058127-45059126 Solanum lycopersicum
Solyc02g080990.1 1.0kb downstream 1.0kb downstream 8397 true SL2.50ch02: 45049730-45058126 Solanum lycopersicum
Solyc02g080990.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 45049730-45050729 Solanum lycopersicum
Solyc02g080990.1 2.0kb upstream 2.0kb upstream 9397 true SL2.50ch02: 45050730-45060126 Solanum lycopersicum
Solyc02g080990.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 45058127-45060126 Solanum lycopersicum
Solyc02g080990.1 2.0kb downstream 2.0kb downstream 9397 true SL2.50ch02: 45048730-45058126 Solanum lycopersicum
Solyc02g080990.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 45048730-45050729 Solanum lycopersicum
Solyc02g080990.1 5.0kb upstream 5.0kb upstream 12397 true SL2.50ch02: 45050730-45063126 Solanum lycopersicum
Solyc02g080990.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 45058127-45063126 Solanum lycopersicum
Solyc02g080990.1 5.0kb downstream 5.0kb downstream 12397 true SL2.50ch02: 45045730-45058126 Solanum lycopersicum
Solyc02g080990.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 45045730-45050729 Solanum lycopersicum
Solyc02g080990.1 10.0kb upstream 10.0kb upstream 17397 true SL2.50ch02: 45050730-45068126 Solanum lycopersicum
Solyc02g080990.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 45058127-45068126 Solanum lycopersicum
Solyc02g080990.1 10.0kb downstream 10.0kb downstream 17397 true SL2.50ch02: 45040730-45058126 Solanum lycopersicum
Solyc02g080990.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 45040730-45050729 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041369 5273 Angiosperm View MSA
121365710 5263 Asterids Singleton cluster - no MSA
123749958 5271 Pentapetalae View MSA
122789048 5272 Eudicot View MSA
121347479 5274 Embryophyte View MSA
123424257 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain