Gene : Solyc02g080880.2 S. lycopersicum ITAG2.4
Defline:  (1 of 6) 3.4.23.40 - Phytepsin Description:  Aspartic proteinase (AHRD V1 **-* Q8L6A8_THECC); contains Interpro domain(s) IPR001461 Peptidase A1
Genomic Order:  1969 Name:  ? Solyc02g080880.2
Secondary Identifier:  ? PAC:36156924
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g080880.2 0.5kb upstream 0.5kb upstream 6211 true SL2.50ch02: 44975702-44981912 Solanum lycopersicum
Solyc02g080880.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 44981413-44981912 Solanum lycopersicum
Solyc02g080880.2 0.5kb downstream 0.5kb downstream 6211 true SL2.50ch02: 44975202-44981412 Solanum lycopersicum
Solyc02g080880.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 44975202-44975701 Solanum lycopersicum
Solyc02g080880.2 1.0kb upstream 1.0kb upstream 6711 true SL2.50ch02: 44975702-44982412 Solanum lycopersicum
Solyc02g080880.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 44981413-44982412 Solanum lycopersicum
Solyc02g080880.2 1.0kb downstream 1.0kb downstream 6711 true SL2.50ch02: 44974702-44981412 Solanum lycopersicum
Solyc02g080880.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 44974702-44975701 Solanum lycopersicum
Solyc02g080880.2 2.0kb upstream 2.0kb upstream 7711 true SL2.50ch02: 44975702-44983412 Solanum lycopersicum
Solyc02g080880.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 44981413-44983412 Solanum lycopersicum
Solyc02g080880.2 2.0kb downstream 2.0kb downstream 7711 true SL2.50ch02: 44973702-44981412 Solanum lycopersicum
Solyc02g080880.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 44973702-44975701 Solanum lycopersicum
Solyc02g080880.2 5.0kb upstream 5.0kb upstream 10711 true SL2.50ch02: 44975702-44986412 Solanum lycopersicum
Solyc02g080880.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 44981413-44986412 Solanum lycopersicum
Solyc02g080880.2 5.0kb downstream 5.0kb downstream 10711 true SL2.50ch02: 44970702-44981412 Solanum lycopersicum
Solyc02g080880.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 44970702-44975701 Solanum lycopersicum
Solyc02g080880.2 10.0kb upstream 10.0kb upstream 15711 true SL2.50ch02: 44975702-44991412 Solanum lycopersicum
Solyc02g080880.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 44981413-44991412 Solanum lycopersicum
Solyc02g080880.2 10.0kb downstream 10.0kb downstream 15711 true SL2.50ch02: 44965702-44981412 Solanum lycopersicum
Solyc02g080880.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 44965702-44975701 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
121478014 5263 Asterids View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain