Gene : Solyc02g078390.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K07456 - DNA mismatch repair protein MutS2 (mutS2) Description:  MutS2 protein (AHRD V1 ***- B0JH18_MICAN); contains Interpro domain(s) IPR005747 DNA mismatch repair protein MutS, type 2
Genomic Order:  1721 Name:  ? Solyc02g078390.2
Secondary Identifier:  ? PAC:36156481
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g078390.2 0.5kb upstream 0.5kb upstream 5614 true SL2.50ch02: 43086673-43092286 Solanum lycopersicum
Solyc02g078390.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 43091787-43092286 Solanum lycopersicum
Solyc02g078390.2 0.5kb downstream 0.5kb downstream 5614 true SL2.50ch02: 43086173-43091786 Solanum lycopersicum
Solyc02g078390.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 43086173-43086672 Solanum lycopersicum
Solyc02g078390.2 1.0kb upstream 1.0kb upstream 6114 true SL2.50ch02: 43086673-43092786 Solanum lycopersicum
Solyc02g078390.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 43091787-43092786 Solanum lycopersicum
Solyc02g078390.2 1.0kb downstream 1.0kb downstream 6114 true SL2.50ch02: 43085673-43091786 Solanum lycopersicum
Solyc02g078390.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 43085673-43086672 Solanum lycopersicum
Solyc02g078390.2 2.0kb upstream 2.0kb upstream 7114 true SL2.50ch02: 43086673-43093786 Solanum lycopersicum
Solyc02g078390.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 43091787-43093786 Solanum lycopersicum
Solyc02g078390.2 2.0kb downstream 2.0kb downstream 7114 true SL2.50ch02: 43084673-43091786 Solanum lycopersicum
Solyc02g078390.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 43084673-43086672 Solanum lycopersicum
Solyc02g078390.2 5.0kb upstream 5.0kb upstream 10114 true SL2.50ch02: 43086673-43096786 Solanum lycopersicum
Solyc02g078390.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 43091787-43096786 Solanum lycopersicum
Solyc02g078390.2 5.0kb downstream 5.0kb downstream 10114 true SL2.50ch02: 43081673-43091786 Solanum lycopersicum
Solyc02g078390.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 43081673-43086672 Solanum lycopersicum
Solyc02g078390.2 10.0kb upstream 10.0kb upstream 15114 true SL2.50ch02: 43086673-43101786 Solanum lycopersicum
Solyc02g078390.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 43091787-43101786 Solanum lycopersicum
Solyc02g078390.2 10.0kb downstream 10.0kb downstream 15114 true SL2.50ch02: 43076673-43091786 Solanum lycopersicum
Solyc02g078390.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 43076673-43086672 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466645 5263 Asterids View MSA
123739589 5271 Pentapetalae View MSA
122790305 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain