Gene : Solyc02g078440.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03144 - transcription initiation factor TFIIH subunit 4 (TFIIH4, GTF2H4, TFB2) Description:  RNA polymerase II transcription factor B subunit 2 (AHRD V1 **** B2WEG4_PYRTR); contains Interpro domain(s) IPR004598 Transcription factor Tfb2
Genomic Order:  1726 Name:  ? Solyc02g078440.2
Secondary Identifier:  ? PAC:36156821
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g078440.2 0.5kb upstream 0.5kb upstream 7198 true SL2.50ch02: 43112592-43119789 Solanum lycopersicum
Solyc02g078440.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 43112592-43113091 Solanum lycopersicum
Solyc02g078440.2 0.5kb downstream 0.5kb downstream 7198 true SL2.50ch02: 43113092-43120289 Solanum lycopersicum
Solyc02g078440.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 43119790-43120289 Solanum lycopersicum
Solyc02g078440.2 1.0kb upstream 1.0kb upstream 7698 true SL2.50ch02: 43112092-43119789 Solanum lycopersicum
Solyc02g078440.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 43112092-43113091 Solanum lycopersicum
Solyc02g078440.2 1.0kb downstream 1.0kb downstream 7698 true SL2.50ch02: 43113092-43120789 Solanum lycopersicum
Solyc02g078440.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 43119790-43120789 Solanum lycopersicum
Solyc02g078440.2 2.0kb upstream 2.0kb upstream 8698 true SL2.50ch02: 43111092-43119789 Solanum lycopersicum
Solyc02g078440.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 43111092-43113091 Solanum lycopersicum
Solyc02g078440.2 2.0kb downstream 2.0kb downstream 8698 true SL2.50ch02: 43113092-43121789 Solanum lycopersicum
Solyc02g078440.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 43119790-43121789 Solanum lycopersicum
Solyc02g078440.2 5.0kb upstream 5.0kb upstream 11698 true SL2.50ch02: 43108092-43119789 Solanum lycopersicum
Solyc02g078440.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 43108092-43113091 Solanum lycopersicum
Solyc02g078440.2 5.0kb downstream 5.0kb downstream 11698 true SL2.50ch02: 43113092-43124789 Solanum lycopersicum
Solyc02g078440.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 43119790-43124789 Solanum lycopersicum
Solyc02g078440.2 10.0kb upstream 10.0kb upstream 16698 true SL2.50ch02: 43103092-43119789 Solanum lycopersicum
Solyc02g078440.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 43103092-43113091 Solanum lycopersicum
Solyc02g078440.2 10.0kb downstream 10.0kb downstream 16698 true SL2.50ch02: 43113092-43129789 Solanum lycopersicum
Solyc02g078440.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 43119790-43129789 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467440 5263 Asterids View MSA
123747685 5271 Pentapetalae View MSA
122797891 5272 Eudicot View MSA
122042198 5273 Angiosperm View MSA
121346770 5274 Embryophyte View MSA
123427579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain