Gene : Solyc02g077650.1 S. lycopersicum ITAG2.4
Defline:  (1 of 27) PF01535//PF12854//PF13041 - PPR repeat (PPR) // PPR repeat (PPR_1) // PPR repeat family (PPR_2) Description:  Pentatricopeptide repeat (AHRD V1 ***- A2Q513_MEDTR); contains Interpro domain(s) IPR002885 Pentatricopeptide repeat
Genomic Order:  1647 Name:  ? Solyc02g077650.1
Secondary Identifier:  ? PAC:36156573
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc02g077650.1 0.5kb upstream 0.5kb upstream 1940 true SL2.50ch02: 42539084-42541023 Solanum lycopersicum
Solyc02g077650.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch02: 42540524-42541023 Solanum lycopersicum
Solyc02g077650.1 0.5kb downstream 0.5kb downstream 1940 true SL2.50ch02: 42538584-42540523 Solanum lycopersicum
Solyc02g077650.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch02: 42538584-42539083 Solanum lycopersicum
Solyc02g077650.1 1.0kb upstream 1.0kb upstream 2440 true SL2.50ch02: 42539084-42541523 Solanum lycopersicum
Solyc02g077650.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch02: 42540524-42541523 Solanum lycopersicum
Solyc02g077650.1 1.0kb downstream 1.0kb downstream 2440 true SL2.50ch02: 42538084-42540523 Solanum lycopersicum
Solyc02g077650.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch02: 42538084-42539083 Solanum lycopersicum
Solyc02g077650.1 2.0kb upstream 2.0kb upstream 3440 true SL2.50ch02: 42539084-42542523 Solanum lycopersicum
Solyc02g077650.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch02: 42540524-42542523 Solanum lycopersicum
Solyc02g077650.1 2.0kb downstream 2.0kb downstream 3440 true SL2.50ch02: 42537084-42540523 Solanum lycopersicum
Solyc02g077650.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch02: 42537084-42539083 Solanum lycopersicum
Solyc02g077650.1 5.0kb upstream 5.0kb upstream 6440 true SL2.50ch02: 42539084-42545523 Solanum lycopersicum
Solyc02g077650.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch02: 42540524-42545523 Solanum lycopersicum
Solyc02g077650.1 5.0kb downstream 5.0kb downstream 6440 true SL2.50ch02: 42534084-42540523 Solanum lycopersicum
Solyc02g077650.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch02: 42534084-42539083 Solanum lycopersicum
Solyc02g077650.1 10.0kb upstream 10.0kb upstream 11440 true SL2.50ch02: 42539084-42550523 Solanum lycopersicum
Solyc02g077650.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch02: 42540524-42550523 Solanum lycopersicum
Solyc02g077650.1 10.0kb downstream 10.0kb downstream 11440 true SL2.50ch02: 42529084-42540523 Solanum lycopersicum
Solyc02g077650.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch02: 42529084-42539083 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468300 5263 Asterids View MSA
123750623 5271 Pentapetalae View MSA
122791820 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain